Gene : Thecc1EG037710 T. cacao v1.1
Defline:  (1 of 2) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  894
Name:  ? Thecc1EG037710 Secondary Identifier:  ? PAC:27425712
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037710 0.5kb upstream 0.5kb upstream 3503 true scaffold_9: 4896392-4899894 Theobroma cacao
Thecc1EG037710 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4896392-4896891 Theobroma cacao
Thecc1EG037710 0.5kb downstream 0.5kb downstream 3503 true scaffold_9: 4896892-4900394 Theobroma cacao
Thecc1EG037710 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4899895-4900394 Theobroma cacao
Thecc1EG037710 1.0kb upstream 1.0kb upstream 4003 true scaffold_9: 4895892-4899894 Theobroma cacao
Thecc1EG037710 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4895892-4896891 Theobroma cacao
Thecc1EG037710 1.0kb downstream 1.0kb downstream 4003 true scaffold_9: 4896892-4900894 Theobroma cacao
Thecc1EG037710 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4899895-4900894 Theobroma cacao
Thecc1EG037710 2.0kb upstream 2.0kb upstream 5003 true scaffold_9: 4894892-4899894 Theobroma cacao
Thecc1EG037710 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4894892-4896891 Theobroma cacao
Thecc1EG037710 2.0kb downstream 2.0kb downstream 5003 true scaffold_9: 4896892-4901894 Theobroma cacao
Thecc1EG037710 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4899895-4901894 Theobroma cacao
Thecc1EG037710 5.0kb upstream 5.0kb upstream 8003 true scaffold_9: 4891892-4899894 Theobroma cacao
Thecc1EG037710 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4891892-4896891 Theobroma cacao
Thecc1EG037710 5.0kb downstream 5.0kb downstream 8003 true scaffold_9: 4896892-4904894 Theobroma cacao
Thecc1EG037710 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4899895-4904894 Theobroma cacao
Thecc1EG037710 10.0kb upstream 10.0kb upstream 13003 true scaffold_9: 4886892-4899894 Theobroma cacao
Thecc1EG037710 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4886892-4896891 Theobroma cacao
Thecc1EG037710 10.0kb downstream 10.0kb downstream 13003 true scaffold_9: 4896892-4909894 Theobroma cacao
Thecc1EG037710 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4899895-4909894 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831985 5264 Brassicales-Malvales View MSA
124339919 5266 SBM View MSA
124244563 5268 Malvidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain