Gene : Thecc1EG037700 T. cacao v1.1
Defline:  Plasma membrane (69%P) Genomic Order:  885
Name:  ? Thecc1EG037700 Secondary Identifier:  ? PAC:27429197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037700 0.5kb upstream 0.5kb upstream 3354 true scaffold_9: 4848602-4851955 Theobroma cacao
Thecc1EG037700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4848602-4849101 Theobroma cacao
Thecc1EG037700 0.5kb downstream 0.5kb downstream 3354 true scaffold_9: 4849102-4852455 Theobroma cacao
Thecc1EG037700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4851956-4852455 Theobroma cacao
Thecc1EG037700 1.0kb upstream 1.0kb upstream 3854 true scaffold_9: 4848102-4851955 Theobroma cacao
Thecc1EG037700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4848102-4849101 Theobroma cacao
Thecc1EG037700 1.0kb downstream 1.0kb downstream 3854 true scaffold_9: 4849102-4852955 Theobroma cacao
Thecc1EG037700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4851956-4852955 Theobroma cacao
Thecc1EG037700 2.0kb upstream 2.0kb upstream 4854 true scaffold_9: 4847102-4851955 Theobroma cacao
Thecc1EG037700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4847102-4849101 Theobroma cacao
Thecc1EG037700 2.0kb downstream 2.0kb downstream 4854 true scaffold_9: 4849102-4853955 Theobroma cacao
Thecc1EG037700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4851956-4853955 Theobroma cacao
Thecc1EG037700 5.0kb upstream 5.0kb upstream 7854 true scaffold_9: 4844102-4851955 Theobroma cacao
Thecc1EG037700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4844102-4849101 Theobroma cacao
Thecc1EG037700 5.0kb downstream 5.0kb downstream 7854 true scaffold_9: 4849102-4856955 Theobroma cacao
Thecc1EG037700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4851956-4856955 Theobroma cacao
Thecc1EG037700 10.0kb upstream 10.0kb upstream 12854 true scaffold_9: 4839102-4851955 Theobroma cacao
Thecc1EG037700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4839102-4849101 Theobroma cacao
Thecc1EG037700 10.0kb downstream 10.0kb downstream 12854 true scaffold_9: 4849102-4861955 Theobroma cacao
Thecc1EG037700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4851956-4861955 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839748 5264 Brassicales-Malvales View MSA
124336414 5266 SBM View MSA
124238010 5268 Malvidae View MSA
124063151 5270 Rosid View MSA
123736576 5271 Pentapetalae View MSA
122791262 5272 Eudicot View MSA
122043207 5273 Angiosperm View MSA
121346202 5274 Embryophyte View MSA
123425284 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain