Gene : Thecc1EG037693 T. cacao v1.1
Defline:  (1 of 1) PTHR23416//PTHR23416:SF2 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 5 Genomic Order:  878
Name:  ? Thecc1EG037693 Secondary Identifier:  ? PAC:27426636
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYSTSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-6936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037693 0.5kb upstream 0.5kb upstream 2196 true scaffold_9: 4822332-4824527 Theobroma cacao
Thecc1EG037693 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4822332-4822831 Theobroma cacao
Thecc1EG037693 0.5kb downstream 0.5kb downstream 2196 true scaffold_9: 4822832-4825027 Theobroma cacao
Thecc1EG037693 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4824528-4825027 Theobroma cacao
Thecc1EG037693 1.0kb upstream 1.0kb upstream 2696 true scaffold_9: 4821832-4824527 Theobroma cacao
Thecc1EG037693 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4821832-4822831 Theobroma cacao
Thecc1EG037693 1.0kb downstream 1.0kb downstream 2696 true scaffold_9: 4822832-4825527 Theobroma cacao
Thecc1EG037693 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4824528-4825527 Theobroma cacao
Thecc1EG037693 2.0kb upstream 2.0kb upstream 3696 true scaffold_9: 4820832-4824527 Theobroma cacao
Thecc1EG037693 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4820832-4822831 Theobroma cacao
Thecc1EG037693 2.0kb downstream 2.0kb downstream 3696 true scaffold_9: 4822832-4826527 Theobroma cacao
Thecc1EG037693 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4824528-4826527 Theobroma cacao
Thecc1EG037693 5.0kb upstream 5.0kb upstream 6696 true scaffold_9: 4817832-4824527 Theobroma cacao
Thecc1EG037693 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4817832-4822831 Theobroma cacao
Thecc1EG037693 5.0kb downstream 5.0kb downstream 6696 true scaffold_9: 4822832-4829527 Theobroma cacao
Thecc1EG037693 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4824528-4829527 Theobroma cacao
Thecc1EG037693 10.0kb upstream 10.0kb upstream 11696 true scaffold_9: 4812832-4824527 Theobroma cacao
Thecc1EG037693 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4812832-4822831 Theobroma cacao
Thecc1EG037693 10.0kb downstream 10.0kb downstream 11696 true scaffold_9: 4822832-4834527 Theobroma cacao
Thecc1EG037693 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4824528-4834527 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828462 5264 Brassicales-Malvales View MSA
124338589 5266 SBM View MSA
124250792 5268 Malvidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain