Gene : Thecc1EG037936 T. cacao v1.1
Defline:  (1 of 3) K08490 - syntaxin 5 (STX5) Genomic Order:  1100
Name:  ? Thecc1EG037936 Secondary Identifier:  ? PAC:27427000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037936 0.5kb upstream 0.5kb upstream 5358 true scaffold_9: 6117704-6123061 Theobroma cacao
Thecc1EG037936 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6117704-6118203 Theobroma cacao
Thecc1EG037936 0.5kb downstream 0.5kb downstream 5358 true scaffold_9: 6118204-6123561 Theobroma cacao
Thecc1EG037936 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6123062-6123561 Theobroma cacao
Thecc1EG037936 1.0kb upstream 1.0kb upstream 5858 true scaffold_9: 6117204-6123061 Theobroma cacao
Thecc1EG037936 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6117204-6118203 Theobroma cacao
Thecc1EG037936 1.0kb downstream 1.0kb downstream 5858 true scaffold_9: 6118204-6124061 Theobroma cacao
Thecc1EG037936 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6123062-6124061 Theobroma cacao
Thecc1EG037936 2.0kb upstream 2.0kb upstream 6858 true scaffold_9: 6116204-6123061 Theobroma cacao
Thecc1EG037936 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6116204-6118203 Theobroma cacao
Thecc1EG037936 2.0kb downstream 2.0kb downstream 6858 true scaffold_9: 6118204-6125061 Theobroma cacao
Thecc1EG037936 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6123062-6125061 Theobroma cacao
Thecc1EG037936 5.0kb upstream 5.0kb upstream 9858 true scaffold_9: 6113204-6123061 Theobroma cacao
Thecc1EG037936 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6113204-6118203 Theobroma cacao
Thecc1EG037936 5.0kb downstream 5.0kb downstream 9858 true scaffold_9: 6118204-6128061 Theobroma cacao
Thecc1EG037936 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6123062-6128061 Theobroma cacao
Thecc1EG037936 10.0kb upstream 10.0kb upstream 14858 true scaffold_9: 6108204-6123061 Theobroma cacao
Thecc1EG037936 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6108204-6118203 Theobroma cacao
Thecc1EG037936 10.0kb downstream 10.0kb downstream 14858 true scaffold_9: 6118204-6133061 Theobroma cacao
Thecc1EG037936 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6123062-6133061 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829076 5264 Brassicales-Malvales View MSA
124351306 5266 SBM View MSA
124241378 5268 Malvidae View MSA
124069963 5270 Rosid View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain