Gene : Thecc1EG037911 T. cacao v1.1
Defline:  (1 of 1) PTHR11361:SF31 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  1077
Name:  ? Thecc1EG037911 Secondary Identifier:  ? PAC:27427342
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037911 0.5kb upstream 0.5kb upstream 10232 true scaffold_9: 5960756-5970987 Theobroma cacao
Thecc1EG037911 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5960756-5961255 Theobroma cacao
Thecc1EG037911 0.5kb downstream 0.5kb downstream 10232 true scaffold_9: 5961256-5971487 Theobroma cacao
Thecc1EG037911 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5970988-5971487 Theobroma cacao
Thecc1EG037911 1.0kb upstream 1.0kb upstream 10732 true scaffold_9: 5960256-5970987 Theobroma cacao
Thecc1EG037911 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5960256-5961255 Theobroma cacao
Thecc1EG037911 1.0kb downstream 1.0kb downstream 10732 true scaffold_9: 5961256-5971987 Theobroma cacao
Thecc1EG037911 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5970988-5971987 Theobroma cacao
Thecc1EG037911 2.0kb upstream 2.0kb upstream 11732 true scaffold_9: 5959256-5970987 Theobroma cacao
Thecc1EG037911 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5959256-5961255 Theobroma cacao
Thecc1EG037911 2.0kb downstream 2.0kb downstream 11732 true scaffold_9: 5961256-5972987 Theobroma cacao
Thecc1EG037911 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5970988-5972987 Theobroma cacao
Thecc1EG037911 5.0kb upstream 5.0kb upstream 14732 true scaffold_9: 5956256-5970987 Theobroma cacao
Thecc1EG037911 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5956256-5961255 Theobroma cacao
Thecc1EG037911 5.0kb downstream 5.0kb downstream 14732 true scaffold_9: 5961256-5975987 Theobroma cacao
Thecc1EG037911 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5970988-5975987 Theobroma cacao
Thecc1EG037911 10.0kb upstream 10.0kb upstream 19732 true scaffold_9: 5951256-5970987 Theobroma cacao
Thecc1EG037911 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5951256-5961255 Theobroma cacao
Thecc1EG037911 10.0kb downstream 10.0kb downstream 19732 true scaffold_9: 5961256-5980987 Theobroma cacao
Thecc1EG037911 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5970988-5980987 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046363 5273 Angiosperm View MSA
123834733 5264 Brassicales-Malvales View MSA
124340424 5266 SBM View MSA
124240518 5268 Malvidae View MSA
124065685 5270 Rosid View MSA
123748625 5271 Pentapetalae View MSA
122788803 5272 Eudicot View MSA
121344642 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain