Gene : Thecc1EG037907 T. cacao v1.1
Defline:  (1 of 1) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  1074
Name:  ? Thecc1EG037907 Secondary Identifier:  ? PAC:27428808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037907 0.5kb upstream 0.5kb upstream 4963 true scaffold_9: 5946291-5951253 Theobroma cacao
Thecc1EG037907 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5946291-5946790 Theobroma cacao
Thecc1EG037907 0.5kb downstream 0.5kb downstream 4963 true scaffold_9: 5946791-5951753 Theobroma cacao
Thecc1EG037907 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5951254-5951753 Theobroma cacao
Thecc1EG037907 1.0kb upstream 1.0kb upstream 5463 true scaffold_9: 5945791-5951253 Theobroma cacao
Thecc1EG037907 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5945791-5946790 Theobroma cacao
Thecc1EG037907 1.0kb downstream 1.0kb downstream 5463 true scaffold_9: 5946791-5952253 Theobroma cacao
Thecc1EG037907 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5951254-5952253 Theobroma cacao
Thecc1EG037907 2.0kb upstream 2.0kb upstream 6463 true scaffold_9: 5944791-5951253 Theobroma cacao
Thecc1EG037907 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5944791-5946790 Theobroma cacao
Thecc1EG037907 2.0kb downstream 2.0kb downstream 6463 true scaffold_9: 5946791-5953253 Theobroma cacao
Thecc1EG037907 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5951254-5953253 Theobroma cacao
Thecc1EG037907 5.0kb upstream 5.0kb upstream 9463 true scaffold_9: 5941791-5951253 Theobroma cacao
Thecc1EG037907 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5941791-5946790 Theobroma cacao
Thecc1EG037907 5.0kb downstream 5.0kb downstream 9463 true scaffold_9: 5946791-5956253 Theobroma cacao
Thecc1EG037907 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5951254-5956253 Theobroma cacao
Thecc1EG037907 10.0kb upstream 10.0kb upstream 14463 true scaffold_9: 5936791-5951253 Theobroma cacao
Thecc1EG037907 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5936791-5946790 Theobroma cacao
Thecc1EG037907 10.0kb downstream 10.0kb downstream 14463 true scaffold_9: 5946791-5961253 Theobroma cacao
Thecc1EG037907 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5951254-5961253 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824363 5264 Brassicales-Malvales View MSA
124349236 5266 SBM View MSA
124246351 5268 Malvidae View MSA
124070962 5270 Rosid View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain