Gene : Thecc1EG037906 T. cacao v1.1
Defline:  (1 of 2) PTHR33168//PTHR33168:SF12 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  1073
Name:  ? Thecc1EG037906 Secondary Identifier:  ? PAC:27428109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037906 0.5kb upstream 0.5kb upstream 1940 true scaffold_9: 5943694-5945633 Theobroma cacao
Thecc1EG037906 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5943694-5944193 Theobroma cacao
Thecc1EG037906 0.5kb downstream 0.5kb downstream 1940 true scaffold_9: 5944194-5946133 Theobroma cacao
Thecc1EG037906 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5945634-5946133 Theobroma cacao
Thecc1EG037906 1.0kb upstream 1.0kb upstream 2440 true scaffold_9: 5943194-5945633 Theobroma cacao
Thecc1EG037906 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5943194-5944193 Theobroma cacao
Thecc1EG037906 1.0kb downstream 1.0kb downstream 2440 true scaffold_9: 5944194-5946633 Theobroma cacao
Thecc1EG037906 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5945634-5946633 Theobroma cacao
Thecc1EG037906 2.0kb upstream 2.0kb upstream 3440 true scaffold_9: 5942194-5945633 Theobroma cacao
Thecc1EG037906 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5942194-5944193 Theobroma cacao
Thecc1EG037906 2.0kb downstream 2.0kb downstream 3440 true scaffold_9: 5944194-5947633 Theobroma cacao
Thecc1EG037906 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5945634-5947633 Theobroma cacao
Thecc1EG037906 5.0kb upstream 5.0kb upstream 6440 true scaffold_9: 5939194-5945633 Theobroma cacao
Thecc1EG037906 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5939194-5944193 Theobroma cacao
Thecc1EG037906 5.0kb downstream 5.0kb downstream 6440 true scaffold_9: 5944194-5950633 Theobroma cacao
Thecc1EG037906 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5945634-5950633 Theobroma cacao
Thecc1EG037906 10.0kb upstream 10.0kb upstream 11440 true scaffold_9: 5934194-5945633 Theobroma cacao
Thecc1EG037906 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5934194-5944193 Theobroma cacao
Thecc1EG037906 10.0kb downstream 10.0kb downstream 11440 true scaffold_9: 5944194-5955633 Theobroma cacao
Thecc1EG037906 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5945634-5955633 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823043 5264 Brassicales-Malvales Singleton cluster - no MSA
124319145 5266 SBM Singleton cluster - no MSA
124167725 5268 Malvidae Singleton cluster - no MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain