Gene : Thecc1EG037898 T. cacao v1.1
Defline:  (1 of 50) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1066
Name:  ? Thecc1EG037898 Secondary Identifier:  ? PAC:27429377
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037898 0.5kb upstream 0.5kb upstream 4108 true scaffold_9: 5918853-5922960 Theobroma cacao
Thecc1EG037898 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5918853-5919352 Theobroma cacao
Thecc1EG037898 0.5kb downstream 0.5kb downstream 4108 true scaffold_9: 5919353-5923460 Theobroma cacao
Thecc1EG037898 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5922961-5923460 Theobroma cacao
Thecc1EG037898 1.0kb upstream 1.0kb upstream 4608 true scaffold_9: 5918353-5922960 Theobroma cacao
Thecc1EG037898 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5918353-5919352 Theobroma cacao
Thecc1EG037898 1.0kb downstream 1.0kb downstream 4608 true scaffold_9: 5919353-5923960 Theobroma cacao
Thecc1EG037898 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5922961-5923960 Theobroma cacao
Thecc1EG037898 2.0kb upstream 2.0kb upstream 5608 true scaffold_9: 5917353-5922960 Theobroma cacao
Thecc1EG037898 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5917353-5919352 Theobroma cacao
Thecc1EG037898 2.0kb downstream 2.0kb downstream 5608 true scaffold_9: 5919353-5924960 Theobroma cacao
Thecc1EG037898 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5922961-5924960 Theobroma cacao
Thecc1EG037898 5.0kb upstream 5.0kb upstream 8608 true scaffold_9: 5914353-5922960 Theobroma cacao
Thecc1EG037898 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5914353-5919352 Theobroma cacao
Thecc1EG037898 5.0kb downstream 5.0kb downstream 8608 true scaffold_9: 5919353-5927960 Theobroma cacao
Thecc1EG037898 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5922961-5927960 Theobroma cacao
Thecc1EG037898 10.0kb upstream 10.0kb upstream 13608 true scaffold_9: 5909353-5922960 Theobroma cacao
Thecc1EG037898 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5909353-5919352 Theobroma cacao
Thecc1EG037898 10.0kb downstream 10.0kb downstream 13608 true scaffold_9: 5919353-5932960 Theobroma cacao
Thecc1EG037898 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5922961-5932960 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838419 5264 Brassicales-Malvales View MSA
124344560 5266 SBM View MSA
124246401 5268 Malvidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain