Gene : Thecc1EG037894 T. cacao v1.1
Defline:  (1 of 2) PTHR12161//PTHR12161:SF14 - UNCHARACTERIZED DUF292 // REGULATOR OF VPS4 Genomic Order:  1062
Name:  ? Thecc1EG037894 Secondary Identifier:  ? PAC:27425640
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037894 0.5kb upstream 0.5kb upstream 8585 true scaffold_9: 5894058-5902642 Theobroma cacao
Thecc1EG037894 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5894058-5894557 Theobroma cacao
Thecc1EG037894 0.5kb downstream 0.5kb downstream 8585 true scaffold_9: 5894558-5903142 Theobroma cacao
Thecc1EG037894 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5902643-5903142 Theobroma cacao
Thecc1EG037894 1.0kb upstream 1.0kb upstream 9085 true scaffold_9: 5893558-5902642 Theobroma cacao
Thecc1EG037894 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5893558-5894557 Theobroma cacao
Thecc1EG037894 1.0kb downstream 1.0kb downstream 9085 true scaffold_9: 5894558-5903642 Theobroma cacao
Thecc1EG037894 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5902643-5903642 Theobroma cacao
Thecc1EG037894 2.0kb upstream 2.0kb upstream 10085 true scaffold_9: 5892558-5902642 Theobroma cacao
Thecc1EG037894 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5892558-5894557 Theobroma cacao
Thecc1EG037894 2.0kb downstream 2.0kb downstream 10085 true scaffold_9: 5894558-5904642 Theobroma cacao
Thecc1EG037894 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5902643-5904642 Theobroma cacao
Thecc1EG037894 5.0kb upstream 5.0kb upstream 13085 true scaffold_9: 5889558-5902642 Theobroma cacao
Thecc1EG037894 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5889558-5894557 Theobroma cacao
Thecc1EG037894 5.0kb downstream 5.0kb downstream 13085 true scaffold_9: 5894558-5907642 Theobroma cacao
Thecc1EG037894 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5902643-5907642 Theobroma cacao
Thecc1EG037894 10.0kb upstream 10.0kb upstream 18085 true scaffold_9: 5884558-5902642 Theobroma cacao
Thecc1EG037894 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5884558-5894557 Theobroma cacao
Thecc1EG037894 10.0kb downstream 10.0kb downstream 18085 true scaffold_9: 5894558-5912642 Theobroma cacao
Thecc1EG037894 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5902643-5912642 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835465 5264 Brassicales-Malvales View MSA
124351115 5266 SBM View MSA
124249863 5268 Malvidae View MSA
124066649 5270 Rosid View MSA
123746994 5271 Pentapetalae View MSA
122787378 5272 Eudicot View MSA
122041860 5273 Angiosperm View MSA
121351542 5274 Embryophyte View MSA
123382216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain