Gene : Thecc1EG037843 T. cacao v1.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF13 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1016
Name:  ? Thecc1EG037843 Secondary Identifier:  ? PAC:27429595
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037843 0.5kb upstream 0.5kb upstream 10033 true scaffold_9: 5605282-5615314 Theobroma cacao
Thecc1EG037843 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5605282-5605781 Theobroma cacao
Thecc1EG037843 0.5kb downstream 0.5kb downstream 10033 true scaffold_9: 5605782-5615814 Theobroma cacao
Thecc1EG037843 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5615315-5615814 Theobroma cacao
Thecc1EG037843 1.0kb upstream 1.0kb upstream 10533 true scaffold_9: 5604782-5615314 Theobroma cacao
Thecc1EG037843 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5604782-5605781 Theobroma cacao
Thecc1EG037843 1.0kb downstream 1.0kb downstream 10533 true scaffold_9: 5605782-5616314 Theobroma cacao
Thecc1EG037843 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5615315-5616314 Theobroma cacao
Thecc1EG037843 2.0kb upstream 2.0kb upstream 11533 true scaffold_9: 5603782-5615314 Theobroma cacao
Thecc1EG037843 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5603782-5605781 Theobroma cacao
Thecc1EG037843 2.0kb downstream 2.0kb downstream 11533 true scaffold_9: 5605782-5617314 Theobroma cacao
Thecc1EG037843 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5615315-5617314 Theobroma cacao
Thecc1EG037843 5.0kb upstream 5.0kb upstream 14533 true scaffold_9: 5600782-5615314 Theobroma cacao
Thecc1EG037843 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5600782-5605781 Theobroma cacao
Thecc1EG037843 5.0kb downstream 5.0kb downstream 14533 true scaffold_9: 5605782-5620314 Theobroma cacao
Thecc1EG037843 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5615315-5620314 Theobroma cacao
Thecc1EG037843 10.0kb upstream 10.0kb upstream 19533 true scaffold_9: 5595782-5615314 Theobroma cacao
Thecc1EG037843 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5595782-5605781 Theobroma cacao
Thecc1EG037843 10.0kb downstream 10.0kb downstream 19533 true scaffold_9: 5605782-5625314 Theobroma cacao
Thecc1EG037843 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5615315-5625314 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824295 5264 Brassicales-Malvales View MSA
124347903 5266 SBM View MSA
124245696 5268 Malvidae View MSA
124070413 5270 Rosid View MSA
123749740 5271 Pentapetalae View MSA
122795160 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain