Gene : Thecc1EG037836 T. cacao v1.1
Defline:  (1 of 4) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) Genomic Order:  1010
Name:  ? Thecc1EG037836 Secondary Identifier:  ? PAC:27430747
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037836 0.5kb upstream 0.5kb upstream 2990 true scaffold_9: 5563493-5566482 Theobroma cacao
Thecc1EG037836 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5563493-5563992 Theobroma cacao
Thecc1EG037836 0.5kb downstream 0.5kb downstream 2990 true scaffold_9: 5563993-5566982 Theobroma cacao
Thecc1EG037836 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5566483-5566982 Theobroma cacao
Thecc1EG037836 1.0kb upstream 1.0kb upstream 3490 true scaffold_9: 5562993-5566482 Theobroma cacao
Thecc1EG037836 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5562993-5563992 Theobroma cacao
Thecc1EG037836 1.0kb downstream 1.0kb downstream 3490 true scaffold_9: 5563993-5567482 Theobroma cacao
Thecc1EG037836 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5566483-5567482 Theobroma cacao
Thecc1EG037836 2.0kb upstream 2.0kb upstream 4490 true scaffold_9: 5561993-5566482 Theobroma cacao
Thecc1EG037836 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5561993-5563992 Theobroma cacao
Thecc1EG037836 2.0kb downstream 2.0kb downstream 4490 true scaffold_9: 5563993-5568482 Theobroma cacao
Thecc1EG037836 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5566483-5568482 Theobroma cacao
Thecc1EG037836 5.0kb upstream 5.0kb upstream 7490 true scaffold_9: 5558993-5566482 Theobroma cacao
Thecc1EG037836 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5558993-5563992 Theobroma cacao
Thecc1EG037836 5.0kb downstream 5.0kb downstream 7490 true scaffold_9: 5563993-5571482 Theobroma cacao
Thecc1EG037836 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5566483-5571482 Theobroma cacao
Thecc1EG037836 10.0kb upstream 10.0kb upstream 12490 true scaffold_9: 5553993-5566482 Theobroma cacao
Thecc1EG037836 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5553993-5563992 Theobroma cacao
Thecc1EG037836 10.0kb downstream 10.0kb downstream 12490 true scaffold_9: 5563993-5576482 Theobroma cacao
Thecc1EG037836 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5566483-5576482 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833718 5264 Brassicales-Malvales View MSA
124340566 5266 SBM View MSA
124242111 5268 Malvidae View MSA
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain