Gene : Thecc1EG038084 T. cacao v1.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF288 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1219
Name:  ? Thecc1EG038084 Secondary Identifier:  ? PAC:27428893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038084 0.5kb upstream 0.5kb upstream 4592 true scaffold_9: 6884298-6888889 Theobroma cacao
Thecc1EG038084 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6884298-6884797 Theobroma cacao
Thecc1EG038084 0.5kb downstream 0.5kb downstream 4592 true scaffold_9: 6884798-6889389 Theobroma cacao
Thecc1EG038084 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6888890-6889389 Theobroma cacao
Thecc1EG038084 1.0kb upstream 1.0kb upstream 5092 true scaffold_9: 6883798-6888889 Theobroma cacao
Thecc1EG038084 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6883798-6884797 Theobroma cacao
Thecc1EG038084 1.0kb downstream 1.0kb downstream 5092 true scaffold_9: 6884798-6889889 Theobroma cacao
Thecc1EG038084 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6888890-6889889 Theobroma cacao
Thecc1EG038084 2.0kb upstream 2.0kb upstream 6092 true scaffold_9: 6882798-6888889 Theobroma cacao
Thecc1EG038084 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6882798-6884797 Theobroma cacao
Thecc1EG038084 2.0kb downstream 2.0kb downstream 6092 true scaffold_9: 6884798-6890889 Theobroma cacao
Thecc1EG038084 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6888890-6890889 Theobroma cacao
Thecc1EG038084 5.0kb upstream 5.0kb upstream 9092 true scaffold_9: 6879798-6888889 Theobroma cacao
Thecc1EG038084 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6879798-6884797 Theobroma cacao
Thecc1EG038084 5.0kb downstream 5.0kb downstream 9092 true scaffold_9: 6884798-6893889 Theobroma cacao
Thecc1EG038084 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6888890-6893889 Theobroma cacao
Thecc1EG038084 10.0kb upstream 10.0kb upstream 14092 true scaffold_9: 6874798-6888889 Theobroma cacao
Thecc1EG038084 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6874798-6884797 Theobroma cacao
Thecc1EG038084 10.0kb downstream 10.0kb downstream 14092 true scaffold_9: 6884798-6898889 Theobroma cacao
Thecc1EG038084 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6888890-6898889 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824373 5264 Brassicales-Malvales View MSA
124347672 5266 SBM View MSA
124246260 5268 Malvidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain