Gene : Thecc1EG038080 T. cacao v1.1
Defline:  (1 of 2) PTHR10783//PTHR10783:SF44 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SPX DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1216
Name:  ? Thecc1EG038080 Secondary Identifier:  ? PAC:27429462
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038080 0.5kb upstream 0.5kb upstream 3485 true scaffold_9: 6854930-6858414 Theobroma cacao
Thecc1EG038080 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6857915-6858414 Theobroma cacao
Thecc1EG038080 0.5kb downstream 0.5kb downstream 3485 true scaffold_9: 6854430-6857914 Theobroma cacao
Thecc1EG038080 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6854430-6854929 Theobroma cacao
Thecc1EG038080 1.0kb upstream 1.0kb upstream 3985 true scaffold_9: 6854930-6858914 Theobroma cacao
Thecc1EG038080 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6857915-6858914 Theobroma cacao
Thecc1EG038080 1.0kb downstream 1.0kb downstream 3985 true scaffold_9: 6853930-6857914 Theobroma cacao
Thecc1EG038080 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6853930-6854929 Theobroma cacao
Thecc1EG038080 2.0kb upstream 2.0kb upstream 4985 true scaffold_9: 6854930-6859914 Theobroma cacao
Thecc1EG038080 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6857915-6859914 Theobroma cacao
Thecc1EG038080 2.0kb downstream 2.0kb downstream 4985 true scaffold_9: 6852930-6857914 Theobroma cacao
Thecc1EG038080 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6852930-6854929 Theobroma cacao
Thecc1EG038080 5.0kb upstream 5.0kb upstream 7985 true scaffold_9: 6854930-6862914 Theobroma cacao
Thecc1EG038080 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6857915-6862914 Theobroma cacao
Thecc1EG038080 5.0kb downstream 5.0kb downstream 7985 true scaffold_9: 6849930-6857914 Theobroma cacao
Thecc1EG038080 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6849930-6854929 Theobroma cacao
Thecc1EG038080 10.0kb upstream 10.0kb upstream 12985 true scaffold_9: 6854930-6867914 Theobroma cacao
Thecc1EG038080 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6857915-6867914 Theobroma cacao
Thecc1EG038080 10.0kb downstream 10.0kb downstream 12985 true scaffold_9: 6844930-6857914 Theobroma cacao
Thecc1EG038080 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6844930-6854929 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836639 5264 Brassicales-Malvales View MSA
124340394 5266 SBM View MSA
124244316 5268 Malvidae View MSA
124067736 5270 Rosid View MSA
123746025 5271 Pentapetalae View MSA
122794466 5272 Eudicot View MSA
122045577 5273 Angiosperm View MSA
121351061 5274 Embryophyte View MSA
123427814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain