Gene : Thecc1EG038091 T. cacao v1.1

Defline:  (1 of 5) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  1224
Name:  ? Thecc1EG038091 Secondary Identifier:  ? PAC:27429617

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038091 0.5kb upstream 0.5kb upstream 4784 true scaffold_9: 6916002-6920785 Theobroma cacao
Thecc1EG038091 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6916002-6916501 Theobroma cacao
Thecc1EG038091 0.5kb downstream 0.5kb downstream 4784 true scaffold_9: 6916502-6921285 Theobroma cacao
Thecc1EG038091 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6920786-6921285 Theobroma cacao
Thecc1EG038091 1.0kb upstream 1.0kb upstream 5284 true scaffold_9: 6915502-6920785 Theobroma cacao
Thecc1EG038091 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6915502-6916501 Theobroma cacao
Thecc1EG038091 1.0kb downstream 1.0kb downstream 5284 true scaffold_9: 6916502-6921785 Theobroma cacao
Thecc1EG038091 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6920786-6921785 Theobroma cacao
Thecc1EG038091 2.0kb upstream 2.0kb upstream 6284 true scaffold_9: 6914502-6920785 Theobroma cacao
Thecc1EG038091 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6914502-6916501 Theobroma cacao
Thecc1EG038091 2.0kb downstream 2.0kb downstream 6284 true scaffold_9: 6916502-6922785 Theobroma cacao
Thecc1EG038091 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6920786-6922785 Theobroma cacao
Thecc1EG038091 5.0kb upstream 5.0kb upstream 9284 true scaffold_9: 6911502-6920785 Theobroma cacao
Thecc1EG038091 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6911502-6916501 Theobroma cacao
Thecc1EG038091 5.0kb downstream 5.0kb downstream 9284 true scaffold_9: 6916502-6925785 Theobroma cacao
Thecc1EG038091 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6920786-6925785 Theobroma cacao
Thecc1EG038091 10.0kb upstream 10.0kb upstream 14284 true scaffold_9: 6906502-6920785 Theobroma cacao
Thecc1EG038091 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6906502-6916501 Theobroma cacao
Thecc1EG038091 10.0kb downstream 10.0kb downstream 14284 true scaffold_9: 6916502-6930785 Theobroma cacao
Thecc1EG038091 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6920786-6930785 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835231 5264 Brassicales-Malvales View MSA
124351095 5266 SBM View MSA
124254047 5268 Malvidae View MSA
124070890 5270 Rosid View MSA
123742803 5271 Pentapetalae View MSA
122796350 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain