Gene : Thecc1EG038078 T. cacao v1.1
Defline:  (1 of 1) K00510 - heme oxygenase (HMOX, hmuO, ho) Genomic Order:  1214
Name:  ? Thecc1EG038078 Secondary Identifier:  ? PAC:27427026
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5874 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038078 0.5kb upstream 0.5kb upstream 4802 true scaffold_9: 6843651-6848452 Theobroma cacao
Thecc1EG038078 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6847953-6848452 Theobroma cacao
Thecc1EG038078 0.5kb downstream 0.5kb downstream 4802 true scaffold_9: 6843151-6847952 Theobroma cacao
Thecc1EG038078 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6843151-6843650 Theobroma cacao
Thecc1EG038078 1.0kb upstream 1.0kb upstream 5302 true scaffold_9: 6843651-6848952 Theobroma cacao
Thecc1EG038078 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6847953-6848952 Theobroma cacao
Thecc1EG038078 1.0kb downstream 1.0kb downstream 5302 true scaffold_9: 6842651-6847952 Theobroma cacao
Thecc1EG038078 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6842651-6843650 Theobroma cacao
Thecc1EG038078 2.0kb upstream 2.0kb upstream 6302 true scaffold_9: 6843651-6849952 Theobroma cacao
Thecc1EG038078 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6847953-6849952 Theobroma cacao
Thecc1EG038078 2.0kb downstream 2.0kb downstream 6302 true scaffold_9: 6841651-6847952 Theobroma cacao
Thecc1EG038078 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6841651-6843650 Theobroma cacao
Thecc1EG038078 5.0kb upstream 5.0kb upstream 9302 true scaffold_9: 6843651-6852952 Theobroma cacao
Thecc1EG038078 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6847953-6852952 Theobroma cacao
Thecc1EG038078 5.0kb downstream 5.0kb downstream 9302 true scaffold_9: 6838651-6847952 Theobroma cacao
Thecc1EG038078 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6838651-6843650 Theobroma cacao
Thecc1EG038078 10.0kb upstream 10.0kb upstream 14302 true scaffold_9: 6843651-6857952 Theobroma cacao
Thecc1EG038078 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6847953-6857952 Theobroma cacao
Thecc1EG038078 10.0kb downstream 10.0kb downstream 14302 true scaffold_9: 6833651-6847952 Theobroma cacao
Thecc1EG038078 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6833651-6843650 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837590 5264 Brassicales-Malvales View MSA
124338986 5266 SBM View MSA
124253166 5268 Malvidae View MSA
124067644 5270 Rosid View MSA
123739396 5271 Pentapetalae View MSA
122788325 5272 Eudicot View MSA
122047622 5273 Angiosperm View MSA
121347679 5274 Embryophyte View MSA
123424297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain