Gene : Thecc1EG038055 T. cacao v1.1

Defline:  (1 of 8) PF01918 - Alba (Alba) Genomic Order:  1193
Name:  ? Thecc1EG038055 Secondary Identifier:  ? PAC:27426250

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038055 0.5kb upstream 0.5kb upstream 2335 true scaffold_9: 6716039-6718373 Theobroma cacao
Thecc1EG038055 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6716039-6716538 Theobroma cacao
Thecc1EG038055 0.5kb downstream 0.5kb downstream 2335 true scaffold_9: 6716539-6718873 Theobroma cacao
Thecc1EG038055 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6718374-6718873 Theobroma cacao
Thecc1EG038055 1.0kb upstream 1.0kb upstream 2835 true scaffold_9: 6715539-6718373 Theobroma cacao
Thecc1EG038055 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6715539-6716538 Theobroma cacao
Thecc1EG038055 1.0kb downstream 1.0kb downstream 2835 true scaffold_9: 6716539-6719373 Theobroma cacao
Thecc1EG038055 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6718374-6719373 Theobroma cacao
Thecc1EG038055 2.0kb upstream 2.0kb upstream 3835 true scaffold_9: 6714539-6718373 Theobroma cacao
Thecc1EG038055 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6714539-6716538 Theobroma cacao
Thecc1EG038055 2.0kb downstream 2.0kb downstream 3835 true scaffold_9: 6716539-6720373 Theobroma cacao
Thecc1EG038055 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6718374-6720373 Theobroma cacao
Thecc1EG038055 5.0kb upstream 5.0kb upstream 6835 true scaffold_9: 6711539-6718373 Theobroma cacao
Thecc1EG038055 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6711539-6716538 Theobroma cacao
Thecc1EG038055 5.0kb downstream 5.0kb downstream 6835 true scaffold_9: 6716539-6723373 Theobroma cacao
Thecc1EG038055 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6718374-6723373 Theobroma cacao
Thecc1EG038055 10.0kb upstream 10.0kb upstream 11835 true scaffold_9: 6706539-6718373 Theobroma cacao
Thecc1EG038055 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6706539-6716538 Theobroma cacao
Thecc1EG038055 10.0kb downstream 10.0kb downstream 11835 true scaffold_9: 6716539-6728373 Theobroma cacao
Thecc1EG038055 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6718374-6728373 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836105 5264 Brassicales-Malvales View MSA
124345416 5266 SBM View MSA
124246125 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain