Gene : Thecc1EG037999 T. cacao v1.1
Defline:  (1 of 1) K07936 - GTP-binding nuclear protein Ran (RAN) Genomic Order:  1152
Name:  ? Thecc1EG037999 Secondary Identifier:  ? PAC:27431128
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Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ILEUDEG-PWY Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5138 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-6435 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-735 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  
Tcacao VALDEG-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037999 0.5kb upstream 0.5kb upstream 3164 true scaffold_9: 6460700-6463863 Theobroma cacao
Thecc1EG037999 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6460700-6461199 Theobroma cacao
Thecc1EG037999 0.5kb downstream 0.5kb downstream 3164 true scaffold_9: 6461200-6464363 Theobroma cacao
Thecc1EG037999 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6463864-6464363 Theobroma cacao
Thecc1EG037999 1.0kb upstream 1.0kb upstream 3664 true scaffold_9: 6460200-6463863 Theobroma cacao
Thecc1EG037999 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6460200-6461199 Theobroma cacao
Thecc1EG037999 1.0kb downstream 1.0kb downstream 3664 true scaffold_9: 6461200-6464863 Theobroma cacao
Thecc1EG037999 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6463864-6464863 Theobroma cacao
Thecc1EG037999 2.0kb upstream 2.0kb upstream 4664 true scaffold_9: 6459200-6463863 Theobroma cacao
Thecc1EG037999 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6459200-6461199 Theobroma cacao
Thecc1EG037999 2.0kb downstream 2.0kb downstream 4664 true scaffold_9: 6461200-6465863 Theobroma cacao
Thecc1EG037999 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6463864-6465863 Theobroma cacao
Thecc1EG037999 5.0kb upstream 5.0kb upstream 7664 true scaffold_9: 6456200-6463863 Theobroma cacao
Thecc1EG037999 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6456200-6461199 Theobroma cacao
Thecc1EG037999 5.0kb downstream 5.0kb downstream 7664 true scaffold_9: 6461200-6468863 Theobroma cacao
Thecc1EG037999 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6463864-6468863 Theobroma cacao
Thecc1EG037999 10.0kb upstream 10.0kb upstream 12664 true scaffold_9: 6451200-6463863 Theobroma cacao
Thecc1EG037999 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6451200-6461199 Theobroma cacao
Thecc1EG037999 10.0kb downstream 10.0kb downstream 12664 true scaffold_9: 6461200-6473863 Theobroma cacao
Thecc1EG037999 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6463864-6473863 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829338 5264 Brassicales-Malvales View MSA
124347070 5266 SBM View MSA
124237166 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain