Gene : Thecc1EG038258 T. cacao v1.1

Defline:  (1 of 1) PTHR14237//PTHR14237:SF30 - MOLYBDOPTERIN COFACTOR SULFURASE MOSC // MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  1358
Name:  ? Thecc1EG038258 Secondary Identifier:  ? PAC:27428455

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5963 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038258 0.5kb upstream 0.5kb upstream 4943 true scaffold_9: 8039678-8044620 Theobroma cacao
Thecc1EG038258 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8039678-8040177 Theobroma cacao
Thecc1EG038258 0.5kb downstream 0.5kb downstream 4943 true scaffold_9: 8040178-8045120 Theobroma cacao
Thecc1EG038258 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8044621-8045120 Theobroma cacao
Thecc1EG038258 1.0kb upstream 1.0kb upstream 5443 true scaffold_9: 8039178-8044620 Theobroma cacao
Thecc1EG038258 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8039178-8040177 Theobroma cacao
Thecc1EG038258 1.0kb downstream 1.0kb downstream 5443 true scaffold_9: 8040178-8045620 Theobroma cacao
Thecc1EG038258 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8044621-8045620 Theobroma cacao
Thecc1EG038258 2.0kb upstream 2.0kb upstream 6443 true scaffold_9: 8038178-8044620 Theobroma cacao
Thecc1EG038258 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8038178-8040177 Theobroma cacao
Thecc1EG038258 2.0kb downstream 2.0kb downstream 6443 true scaffold_9: 8040178-8046620 Theobroma cacao
Thecc1EG038258 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8044621-8046620 Theobroma cacao
Thecc1EG038258 5.0kb upstream 5.0kb upstream 9443 true scaffold_9: 8035178-8044620 Theobroma cacao
Thecc1EG038258 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8035178-8040177 Theobroma cacao
Thecc1EG038258 5.0kb downstream 5.0kb downstream 9443 true scaffold_9: 8040178-8049620 Theobroma cacao
Thecc1EG038258 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8044621-8049620 Theobroma cacao
Thecc1EG038258 10.0kb upstream 10.0kb upstream 14443 true scaffold_9: 8030178-8044620 Theobroma cacao
Thecc1EG038258 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8030178-8040177 Theobroma cacao
Thecc1EG038258 10.0kb downstream 10.0kb downstream 14443 true scaffold_9: 8040178-8054620 Theobroma cacao
Thecc1EG038258 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8044621-8054620 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832296 5264 Brassicales-Malvales View MSA
124350481 5266 SBM View MSA
124237148 5268 Malvidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain