Gene : Thecc1EG038245 T. cacao v1.1
Defline:  (1 of 2) PTHR15204 - SCYTHE/BAT3 Genomic Order:  1348
Name:  ? Thecc1EG038245 Secondary Identifier:  ? PAC:27426275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038245 0.5kb upstream 0.5kb upstream 17163 true scaffold_9: 7981582-7998744 Theobroma cacao
Thecc1EG038245 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7981582-7982081 Theobroma cacao
Thecc1EG038245 0.5kb downstream 0.5kb downstream 17163 true scaffold_9: 7982082-7999244 Theobroma cacao
Thecc1EG038245 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7998745-7999244 Theobroma cacao
Thecc1EG038245 1.0kb upstream 1.0kb upstream 17663 true scaffold_9: 7981082-7998744 Theobroma cacao
Thecc1EG038245 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7981082-7982081 Theobroma cacao
Thecc1EG038245 1.0kb downstream 1.0kb downstream 17663 true scaffold_9: 7982082-7999744 Theobroma cacao
Thecc1EG038245 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7998745-7999744 Theobroma cacao
Thecc1EG038245 2.0kb upstream 2.0kb upstream 18663 true scaffold_9: 7980082-7998744 Theobroma cacao
Thecc1EG038245 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7980082-7982081 Theobroma cacao
Thecc1EG038245 2.0kb downstream 2.0kb downstream 18663 true scaffold_9: 7982082-8000744 Theobroma cacao
Thecc1EG038245 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7998745-8000744 Theobroma cacao
Thecc1EG038245 5.0kb upstream 5.0kb upstream 21663 true scaffold_9: 7977082-7998744 Theobroma cacao
Thecc1EG038245 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7977082-7982081 Theobroma cacao
Thecc1EG038245 5.0kb downstream 5.0kb downstream 21663 true scaffold_9: 7982082-8003744 Theobroma cacao
Thecc1EG038245 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7998745-8003744 Theobroma cacao
Thecc1EG038245 10.0kb upstream 10.0kb upstream 26663 true scaffold_9: 7972082-7998744 Theobroma cacao
Thecc1EG038245 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7972082-7982081 Theobroma cacao
Thecc1EG038245 10.0kb downstream 10.0kb downstream 26663 true scaffold_9: 7982082-8008744 Theobroma cacao
Thecc1EG038245 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7998745-8008744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829183 5264 Brassicales-Malvales View MSA
124346308 5266 SBM View MSA
124251055 5268 Malvidae View MSA
124065095 5270 Rosid View MSA
123745947 5271 Pentapetalae View MSA
122786650 5272 Eudicot View MSA
122045332 5273 Angiosperm View MSA
121348646 5274 Embryophyte View MSA
123427478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain