Gene : Thecc1EG038216 T. cacao v1.1
Defline:  (1 of 2) PTHR12294//PTHR12294:SF12 - EF HAND DOMAIN FAMILY A1,A2-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1330
Name:  ? Thecc1EG038216 Secondary Identifier:  ? PAC:27430460
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038216 0.5kb upstream 0.5kb upstream 4564 true scaffold_9: 7802210-7806773 Theobroma cacao
Thecc1EG038216 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7806274-7806773 Theobroma cacao
Thecc1EG038216 0.5kb downstream 0.5kb downstream 4564 true scaffold_9: 7801710-7806273 Theobroma cacao
Thecc1EG038216 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7801710-7802209 Theobroma cacao
Thecc1EG038216 1.0kb upstream 1.0kb upstream 5064 true scaffold_9: 7802210-7807273 Theobroma cacao
Thecc1EG038216 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7806274-7807273 Theobroma cacao
Thecc1EG038216 1.0kb downstream 1.0kb downstream 5064 true scaffold_9: 7801210-7806273 Theobroma cacao
Thecc1EG038216 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7801210-7802209 Theobroma cacao
Thecc1EG038216 2.0kb upstream 2.0kb upstream 6064 true scaffold_9: 7802210-7808273 Theobroma cacao
Thecc1EG038216 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7806274-7808273 Theobroma cacao
Thecc1EG038216 2.0kb downstream 2.0kb downstream 6064 true scaffold_9: 7800210-7806273 Theobroma cacao
Thecc1EG038216 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7800210-7802209 Theobroma cacao
Thecc1EG038216 5.0kb upstream 5.0kb upstream 9064 true scaffold_9: 7802210-7811273 Theobroma cacao
Thecc1EG038216 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7806274-7811273 Theobroma cacao
Thecc1EG038216 5.0kb downstream 5.0kb downstream 9064 true scaffold_9: 7797210-7806273 Theobroma cacao
Thecc1EG038216 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7797210-7802209 Theobroma cacao
Thecc1EG038216 10.0kb upstream 10.0kb upstream 14064 true scaffold_9: 7802210-7816273 Theobroma cacao
Thecc1EG038216 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7806274-7816273 Theobroma cacao
Thecc1EG038216 10.0kb downstream 10.0kb downstream 14064 true scaffold_9: 7792210-7806273 Theobroma cacao
Thecc1EG038216 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7792210-7802209 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825430 5264 Brassicales-Malvales View MSA
124348179 5266 SBM View MSA
124246723 5268 Malvidae View MSA
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain