Gene : Thecc1EG038167 T. cacao v1.1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF334 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1289
Name:  ? Thecc1EG038167 Secondary Identifier:  ? PAC:27429949
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7238 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038167 0.5kb upstream 0.5kb upstream 21709 true scaffold_9: 7453565-7475273 Theobroma cacao
Thecc1EG038167 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7474774-7475273 Theobroma cacao
Thecc1EG038167 0.5kb downstream 0.5kb downstream 21709 true scaffold_9: 7453065-7474773 Theobroma cacao
Thecc1EG038167 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7453065-7453564 Theobroma cacao
Thecc1EG038167 1.0kb upstream 1.0kb upstream 22209 true scaffold_9: 7453565-7475773 Theobroma cacao
Thecc1EG038167 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7474774-7475773 Theobroma cacao
Thecc1EG038167 1.0kb downstream 1.0kb downstream 22209 true scaffold_9: 7452565-7474773 Theobroma cacao
Thecc1EG038167 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7452565-7453564 Theobroma cacao
Thecc1EG038167 2.0kb upstream 2.0kb upstream 23209 true scaffold_9: 7453565-7476773 Theobroma cacao
Thecc1EG038167 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7474774-7476773 Theobroma cacao
Thecc1EG038167 2.0kb downstream 2.0kb downstream 23209 true scaffold_9: 7451565-7474773 Theobroma cacao
Thecc1EG038167 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7451565-7453564 Theobroma cacao
Thecc1EG038167 5.0kb upstream 5.0kb upstream 26209 true scaffold_9: 7453565-7479773 Theobroma cacao
Thecc1EG038167 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7474774-7479773 Theobroma cacao
Thecc1EG038167 5.0kb downstream 5.0kb downstream 26209 true scaffold_9: 7448565-7474773 Theobroma cacao
Thecc1EG038167 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7448565-7453564 Theobroma cacao
Thecc1EG038167 10.0kb upstream 10.0kb upstream 31209 true scaffold_9: 7453565-7484773 Theobroma cacao
Thecc1EG038167 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7474774-7484773 Theobroma cacao
Thecc1EG038167 10.0kb downstream 10.0kb downstream 31209 true scaffold_9: 7443565-7474773 Theobroma cacao
Thecc1EG038167 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7443565-7453564 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829547 5264 Brassicales-Malvales View MSA
124337284 5266 SBM View MSA
124251669 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain