Gene : Thecc1EG038440 T. cacao v1.1
Defline:  (1 of 1) PTHR20855:SF47 - EXPRESSED PROTEIN Genomic Order:  1489
Name:  ? Thecc1EG038440 Secondary Identifier:  ? PAC:27429262
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038440 0.5kb upstream 0.5kb upstream 3734 true scaffold_9: 9264003-9267736 Theobroma cacao
Thecc1EG038440 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9267237-9267736 Theobroma cacao
Thecc1EG038440 0.5kb downstream 0.5kb downstream 3734 true scaffold_9: 9263503-9267236 Theobroma cacao
Thecc1EG038440 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9263503-9264002 Theobroma cacao
Thecc1EG038440 1.0kb upstream 1.0kb upstream 4234 true scaffold_9: 9264003-9268236 Theobroma cacao
Thecc1EG038440 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9267237-9268236 Theobroma cacao
Thecc1EG038440 1.0kb downstream 1.0kb downstream 4234 true scaffold_9: 9263003-9267236 Theobroma cacao
Thecc1EG038440 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9263003-9264002 Theobroma cacao
Thecc1EG038440 2.0kb upstream 2.0kb upstream 5234 true scaffold_9: 9264003-9269236 Theobroma cacao
Thecc1EG038440 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9267237-9269236 Theobroma cacao
Thecc1EG038440 2.0kb downstream 2.0kb downstream 5234 true scaffold_9: 9262003-9267236 Theobroma cacao
Thecc1EG038440 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9262003-9264002 Theobroma cacao
Thecc1EG038440 5.0kb upstream 5.0kb upstream 8234 true scaffold_9: 9264003-9272236 Theobroma cacao
Thecc1EG038440 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9267237-9272236 Theobroma cacao
Thecc1EG038440 5.0kb downstream 5.0kb downstream 8234 true scaffold_9: 9259003-9267236 Theobroma cacao
Thecc1EG038440 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9259003-9264002 Theobroma cacao
Thecc1EG038440 10.0kb upstream 10.0kb upstream 13234 true scaffold_9: 9264003-9277236 Theobroma cacao
Thecc1EG038440 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9267237-9277236 Theobroma cacao
Thecc1EG038440 10.0kb downstream 10.0kb downstream 13234 true scaffold_9: 9254003-9267236 Theobroma cacao
Thecc1EG038440 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9254003-9264002 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831286 5264 Brassicales-Malvales View MSA
124337236 5266 SBM View MSA
124242462 5268 Malvidae View MSA
124066963 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain