Gene : Thecc1EG038407 T. cacao v1.1
Defline:  (1 of 1) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1461
Name:  ? Thecc1EG038407 Secondary Identifier:  ? PAC:27429633
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038407 0.5kb upstream 0.5kb upstream 7430 true scaffold_9: 9023149-9030578 Theobroma cacao
Thecc1EG038407 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9023149-9023648 Theobroma cacao
Thecc1EG038407 0.5kb downstream 0.5kb downstream 7430 true scaffold_9: 9023649-9031078 Theobroma cacao
Thecc1EG038407 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9030579-9031078 Theobroma cacao
Thecc1EG038407 1.0kb upstream 1.0kb upstream 7930 true scaffold_9: 9022649-9030578 Theobroma cacao
Thecc1EG038407 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9022649-9023648 Theobroma cacao
Thecc1EG038407 1.0kb downstream 1.0kb downstream 7930 true scaffold_9: 9023649-9031578 Theobroma cacao
Thecc1EG038407 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9030579-9031578 Theobroma cacao
Thecc1EG038407 2.0kb upstream 2.0kb upstream 8930 true scaffold_9: 9021649-9030578 Theobroma cacao
Thecc1EG038407 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9021649-9023648 Theobroma cacao
Thecc1EG038407 2.0kb downstream 2.0kb downstream 8930 true scaffold_9: 9023649-9032578 Theobroma cacao
Thecc1EG038407 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9030579-9032578 Theobroma cacao
Thecc1EG038407 5.0kb upstream 5.0kb upstream 11930 true scaffold_9: 9018649-9030578 Theobroma cacao
Thecc1EG038407 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9018649-9023648 Theobroma cacao
Thecc1EG038407 5.0kb downstream 5.0kb downstream 11930 true scaffold_9: 9023649-9035578 Theobroma cacao
Thecc1EG038407 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9030579-9035578 Theobroma cacao
Thecc1EG038407 10.0kb upstream 10.0kb upstream 16930 true scaffold_9: 9013649-9030578 Theobroma cacao
Thecc1EG038407 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9013649-9023648 Theobroma cacao
Thecc1EG038407 10.0kb downstream 10.0kb downstream 16930 true scaffold_9: 9023649-9040578 Theobroma cacao
Thecc1EG038407 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9030579-9040578 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836299 5264 Brassicales-Malvales View MSA
124345098 5266 SBM View MSA
124251673 5268 Malvidae View MSA
124065342 5270 Rosid View MSA
123753627 5271 Pentapetalae View MSA
122788990 5272 Eudicot View MSA
122047016 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain