Gene : Thecc1EG038288 T. cacao v1.1
Defline:  (1 of 340) PF08263 - Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  1377
Name:  ? Thecc1EG038288 Secondary Identifier:  ? PAC:27426539
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038288 0.5kb upstream 0.5kb upstream 3279 true scaffold_9: 8241418-8244696 Theobroma cacao
Thecc1EG038288 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8241418-8241917 Theobroma cacao
Thecc1EG038288 0.5kb downstream 0.5kb downstream 3279 true scaffold_9: 8241918-8245196 Theobroma cacao
Thecc1EG038288 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8244697-8245196 Theobroma cacao
Thecc1EG038288 1.0kb upstream 1.0kb upstream 3779 true scaffold_9: 8240918-8244696 Theobroma cacao
Thecc1EG038288 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8240918-8241917 Theobroma cacao
Thecc1EG038288 1.0kb downstream 1.0kb downstream 3779 true scaffold_9: 8241918-8245696 Theobroma cacao
Thecc1EG038288 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8244697-8245696 Theobroma cacao
Thecc1EG038288 2.0kb upstream 2.0kb upstream 4779 true scaffold_9: 8239918-8244696 Theobroma cacao
Thecc1EG038288 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8239918-8241917 Theobroma cacao
Thecc1EG038288 2.0kb downstream 2.0kb downstream 4779 true scaffold_9: 8241918-8246696 Theobroma cacao
Thecc1EG038288 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8244697-8246696 Theobroma cacao
Thecc1EG038288 5.0kb upstream 5.0kb upstream 7779 true scaffold_9: 8236918-8244696 Theobroma cacao
Thecc1EG038288 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8236918-8241917 Theobroma cacao
Thecc1EG038288 5.0kb downstream 5.0kb downstream 7779 true scaffold_9: 8241918-8249696 Theobroma cacao
Thecc1EG038288 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8244697-8249696 Theobroma cacao
Thecc1EG038288 10.0kb upstream 10.0kb upstream 12779 true scaffold_9: 8231918-8244696 Theobroma cacao
Thecc1EG038288 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8231918-8241917 Theobroma cacao
Thecc1EG038288 10.0kb downstream 10.0kb downstream 12779 true scaffold_9: 8241918-8254696 Theobroma cacao
Thecc1EG038288 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8244697-8254696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841348 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain