Gene : Thecc1EG038282 T. cacao v1.1
Defline:  (1 of 1) PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Genomic Order:  1376
Name:  ? Thecc1EG038282 Secondary Identifier:  ? PAC:27429722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038282 0.5kb upstream 0.5kb upstream 7768 true scaffold_9: 8196094-8203861 Theobroma cacao
Thecc1EG038282 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8203362-8203861 Theobroma cacao
Thecc1EG038282 0.5kb downstream 0.5kb downstream 7768 true scaffold_9: 8195594-8203361 Theobroma cacao
Thecc1EG038282 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8195594-8196093 Theobroma cacao
Thecc1EG038282 1.0kb upstream 1.0kb upstream 8268 true scaffold_9: 8196094-8204361 Theobroma cacao
Thecc1EG038282 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8203362-8204361 Theobroma cacao
Thecc1EG038282 1.0kb downstream 1.0kb downstream 8268 true scaffold_9: 8195094-8203361 Theobroma cacao
Thecc1EG038282 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8195094-8196093 Theobroma cacao
Thecc1EG038282 2.0kb upstream 2.0kb upstream 9268 true scaffold_9: 8196094-8205361 Theobroma cacao
Thecc1EG038282 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8203362-8205361 Theobroma cacao
Thecc1EG038282 2.0kb downstream 2.0kb downstream 9268 true scaffold_9: 8194094-8203361 Theobroma cacao
Thecc1EG038282 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8194094-8196093 Theobroma cacao
Thecc1EG038282 5.0kb upstream 5.0kb upstream 12268 true scaffold_9: 8196094-8208361 Theobroma cacao
Thecc1EG038282 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8203362-8208361 Theobroma cacao
Thecc1EG038282 5.0kb downstream 5.0kb downstream 12268 true scaffold_9: 8191094-8203361 Theobroma cacao
Thecc1EG038282 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8191094-8196093 Theobroma cacao
Thecc1EG038282 10.0kb upstream 10.0kb upstream 17268 true scaffold_9: 8196094-8213361 Theobroma cacao
Thecc1EG038282 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8203362-8213361 Theobroma cacao
Thecc1EG038282 10.0kb downstream 10.0kb downstream 17268 true scaffold_9: 8186094-8203361 Theobroma cacao
Thecc1EG038282 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8186094-8196093 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829618 5264 Brassicales-Malvales View MSA
124343160 5266 SBM View MSA
124241471 5268 Malvidae View MSA
124071418 5270 Rosid View MSA
123749462 5271 Pentapetalae View MSA
122791717 5272 Eudicot View MSA
122045456 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121347733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain