Gene : Thecc1EG038810 T. cacao v1.1
Defline:  (1 of 2) K11097 - small nuclear ribonucleoprotein E (SNRPE, SME) Genomic Order:  1632
Name:  ? Thecc1EG038810 Secondary Identifier:  ? PAC:27426336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038810 0.5kb upstream 0.5kb upstream 10692 true scaffold_9: 13039029-13049720 Theobroma cacao
Thecc1EG038810 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 13039029-13039528 Theobroma cacao
Thecc1EG038810 0.5kb downstream 0.5kb downstream 10692 true scaffold_9: 13039529-13050220 Theobroma cacao
Thecc1EG038810 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 13049721-13050220 Theobroma cacao
Thecc1EG038810 1.0kb upstream 1.0kb upstream 11192 true scaffold_9: 13038529-13049720 Theobroma cacao
Thecc1EG038810 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 13038529-13039528 Theobroma cacao
Thecc1EG038810 1.0kb downstream 1.0kb downstream 11192 true scaffold_9: 13039529-13050720 Theobroma cacao
Thecc1EG038810 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 13049721-13050720 Theobroma cacao
Thecc1EG038810 2.0kb upstream 2.0kb upstream 12192 true scaffold_9: 13037529-13049720 Theobroma cacao
Thecc1EG038810 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 13037529-13039528 Theobroma cacao
Thecc1EG038810 2.0kb downstream 2.0kb downstream 12192 true scaffold_9: 13039529-13051720 Theobroma cacao
Thecc1EG038810 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 13049721-13051720 Theobroma cacao
Thecc1EG038810 5.0kb upstream 5.0kb upstream 15192 true scaffold_9: 13034529-13049720 Theobroma cacao
Thecc1EG038810 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 13034529-13039528 Theobroma cacao
Thecc1EG038810 5.0kb downstream 5.0kb downstream 15192 true scaffold_9: 13039529-13054720 Theobroma cacao
Thecc1EG038810 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 13049721-13054720 Theobroma cacao
Thecc1EG038810 10.0kb upstream 10.0kb upstream 20192 true scaffold_9: 13029529-13049720 Theobroma cacao
Thecc1EG038810 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 13029529-13039528 Theobroma cacao
Thecc1EG038810 10.0kb downstream 10.0kb downstream 20192 true scaffold_9: 13039529-13059720 Theobroma cacao
Thecc1EG038810 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 13049721-13059720 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836946 5264 Brassicales-Malvales View MSA
124339965 5266 SBM View MSA
124250319 5268 Malvidae View MSA
124065170 5270 Rosid View MSA
123753789 5271 Pentapetalae View MSA
122788242 5272 Eudicot View MSA
122042193 5273 Angiosperm View MSA
121347325 5274 Embryophyte View MSA
123424375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain