Gene : Thecc1EG038749 T. cacao v1.1
Defline:  (1 of 3) K01853 - cycloartenol synthase (E5.4.99.8) Genomic Order:  1614
Name:  ? Thecc1EG038749 Secondary Identifier:  ? PAC:27431247
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038749 0.5kb upstream 0.5kb upstream 48052 true scaffold_9: 12304507-12352558 Theobroma cacao
Thecc1EG038749 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 12352059-12352558 Theobroma cacao
Thecc1EG038749 0.5kb downstream 0.5kb downstream 48052 true scaffold_9: 12304007-12352058 Theobroma cacao
Thecc1EG038749 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 12304007-12304506 Theobroma cacao
Thecc1EG038749 1.0kb upstream 1.0kb upstream 48552 true scaffold_9: 12304507-12353058 Theobroma cacao
Thecc1EG038749 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 12352059-12353058 Theobroma cacao
Thecc1EG038749 1.0kb downstream 1.0kb downstream 48552 true scaffold_9: 12303507-12352058 Theobroma cacao
Thecc1EG038749 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 12303507-12304506 Theobroma cacao
Thecc1EG038749 2.0kb upstream 2.0kb upstream 49552 true scaffold_9: 12304507-12354058 Theobroma cacao
Thecc1EG038749 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 12352059-12354058 Theobroma cacao
Thecc1EG038749 2.0kb downstream 2.0kb downstream 49552 true scaffold_9: 12302507-12352058 Theobroma cacao
Thecc1EG038749 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 12302507-12304506 Theobroma cacao
Thecc1EG038749 5.0kb upstream 5.0kb upstream 52552 true scaffold_9: 12304507-12357058 Theobroma cacao
Thecc1EG038749 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 12352059-12357058 Theobroma cacao
Thecc1EG038749 5.0kb downstream 5.0kb downstream 52552 true scaffold_9: 12299507-12352058 Theobroma cacao
Thecc1EG038749 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 12299507-12304506 Theobroma cacao
Thecc1EG038749 10.0kb upstream 10.0kb upstream 57552 true scaffold_9: 12304507-12362058 Theobroma cacao
Thecc1EG038749 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 12352059-12362058 Theobroma cacao
Thecc1EG038749 10.0kb downstream 10.0kb downstream 57552 true scaffold_9: 12294507-12352058 Theobroma cacao
Thecc1EG038749 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 12294507-12304506 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841762 5264 Brassicales-Malvales View MSA
124323011 5266 SBM View MSA
124255256 5268 Malvidae View MSA
124075439 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain