Gene : Thecc1EG038748 T. cacao v1.1
Defline:  (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) Genomic Order:  1613
Name:  ? Thecc1EG038748 Secondary Identifier:  ? PAC:27425763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038748 0.5kb upstream 0.5kb upstream 13857 true scaffold_9: 12289689-12303545 Theobroma cacao
Thecc1EG038748 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 12289689-12290188 Theobroma cacao
Thecc1EG038748 0.5kb downstream 0.5kb downstream 13857 true scaffold_9: 12290189-12304045 Theobroma cacao
Thecc1EG038748 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 12303546-12304045 Theobroma cacao
Thecc1EG038748 1.0kb upstream 1.0kb upstream 14357 true scaffold_9: 12289189-12303545 Theobroma cacao
Thecc1EG038748 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 12289189-12290188 Theobroma cacao
Thecc1EG038748 1.0kb downstream 1.0kb downstream 14357 true scaffold_9: 12290189-12304545 Theobroma cacao
Thecc1EG038748 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 12303546-12304545 Theobroma cacao
Thecc1EG038748 2.0kb upstream 2.0kb upstream 15357 true scaffold_9: 12288189-12303545 Theobroma cacao
Thecc1EG038748 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 12288189-12290188 Theobroma cacao
Thecc1EG038748 2.0kb downstream 2.0kb downstream 15357 true scaffold_9: 12290189-12305545 Theobroma cacao
Thecc1EG038748 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 12303546-12305545 Theobroma cacao
Thecc1EG038748 5.0kb upstream 5.0kb upstream 18357 true scaffold_9: 12285189-12303545 Theobroma cacao
Thecc1EG038748 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 12285189-12290188 Theobroma cacao
Thecc1EG038748 5.0kb downstream 5.0kb downstream 18357 true scaffold_9: 12290189-12308545 Theobroma cacao
Thecc1EG038748 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 12303546-12308545 Theobroma cacao
Thecc1EG038748 10.0kb upstream 10.0kb upstream 23357 true scaffold_9: 12280189-12303545 Theobroma cacao
Thecc1EG038748 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 12280189-12290188 Theobroma cacao
Thecc1EG038748 10.0kb downstream 10.0kb downstream 23357 true scaffold_9: 12290189-12313545 Theobroma cacao
Thecc1EG038748 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 12303546-12313545 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828021 5264 Brassicales-Malvales View MSA
124341212 5266 SBM View MSA
124241729 5268 Malvidae View MSA
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain