Gene : Thecc1EG038623 T. cacao v1.1
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  1584
Name:  ? Thecc1EG038623 Secondary Identifier:  ? PAC:27426941
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5046 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038623 0.5kb upstream 0.5kb upstream 5533 true scaffold_9: 10813485-10819017 Theobroma cacao
Thecc1EG038623 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10813485-10813984 Theobroma cacao
Thecc1EG038623 0.5kb downstream 0.5kb downstream 5533 true scaffold_9: 10813985-10819517 Theobroma cacao
Thecc1EG038623 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10819018-10819517 Theobroma cacao
Thecc1EG038623 1.0kb upstream 1.0kb upstream 6033 true scaffold_9: 10812985-10819017 Theobroma cacao
Thecc1EG038623 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10812985-10813984 Theobroma cacao
Thecc1EG038623 1.0kb downstream 1.0kb downstream 6033 true scaffold_9: 10813985-10820017 Theobroma cacao
Thecc1EG038623 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10819018-10820017 Theobroma cacao
Thecc1EG038623 2.0kb upstream 2.0kb upstream 7033 true scaffold_9: 10811985-10819017 Theobroma cacao
Thecc1EG038623 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10811985-10813984 Theobroma cacao
Thecc1EG038623 2.0kb downstream 2.0kb downstream 7033 true scaffold_9: 10813985-10821017 Theobroma cacao
Thecc1EG038623 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10819018-10821017 Theobroma cacao
Thecc1EG038623 5.0kb upstream 5.0kb upstream 10033 true scaffold_9: 10808985-10819017 Theobroma cacao
Thecc1EG038623 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10808985-10813984 Theobroma cacao
Thecc1EG038623 5.0kb downstream 5.0kb downstream 10033 true scaffold_9: 10813985-10824017 Theobroma cacao
Thecc1EG038623 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10819018-10824017 Theobroma cacao
Thecc1EG038623 10.0kb upstream 10.0kb upstream 15033 true scaffold_9: 10803985-10819017 Theobroma cacao
Thecc1EG038623 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10803985-10813984 Theobroma cacao
Thecc1EG038623 10.0kb downstream 10.0kb downstream 15033 true scaffold_9: 10813985-10829017 Theobroma cacao
Thecc1EG038623 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10819018-10829017 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830123 5264 Brassicales-Malvales View MSA
124341245 5266 SBM View MSA
124243640 5268 Malvidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain