Gene : Thecc1EG038610 T. cacao v1.1

Defline:  (1 of 2) PTHR33307//PTHR33307:SF2 - FAMILY NOT NAMED // BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  1579
Name:  ? Thecc1EG038610 Secondary Identifier:  ? PAC:27428968

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038610 0.5kb upstream 0.5kb upstream 6100 true scaffold_9: 10700715-10706814 Theobroma cacao
Thecc1EG038610 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10706315-10706814 Theobroma cacao
Thecc1EG038610 0.5kb downstream 0.5kb downstream 6100 true scaffold_9: 10700215-10706314 Theobroma cacao
Thecc1EG038610 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10700215-10700714 Theobroma cacao
Thecc1EG038610 1.0kb upstream 1.0kb upstream 6600 true scaffold_9: 10700715-10707314 Theobroma cacao
Thecc1EG038610 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10706315-10707314 Theobroma cacao
Thecc1EG038610 1.0kb downstream 1.0kb downstream 6600 true scaffold_9: 10699715-10706314 Theobroma cacao
Thecc1EG038610 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10699715-10700714 Theobroma cacao
Thecc1EG038610 2.0kb upstream 2.0kb upstream 7600 true scaffold_9: 10700715-10708314 Theobroma cacao
Thecc1EG038610 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10706315-10708314 Theobroma cacao
Thecc1EG038610 2.0kb downstream 2.0kb downstream 7600 true scaffold_9: 10698715-10706314 Theobroma cacao
Thecc1EG038610 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10698715-10700714 Theobroma cacao
Thecc1EG038610 5.0kb upstream 5.0kb upstream 10600 true scaffold_9: 10700715-10711314 Theobroma cacao
Thecc1EG038610 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10706315-10711314 Theobroma cacao
Thecc1EG038610 5.0kb downstream 5.0kb downstream 10600 true scaffold_9: 10695715-10706314 Theobroma cacao
Thecc1EG038610 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10695715-10700714 Theobroma cacao
Thecc1EG038610 10.0kb upstream 10.0kb upstream 15600 true scaffold_9: 10700715-10716314 Theobroma cacao
Thecc1EG038610 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10706315-10716314 Theobroma cacao
Thecc1EG038610 10.0kb downstream 10.0kb downstream 15600 true scaffold_9: 10690715-10706314 Theobroma cacao
Thecc1EG038610 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10690715-10700714 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836471 5264 Brassicales-Malvales View MSA
124345251 5266 SBM View MSA
124242299 5268 Malvidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain