Gene : Thecc1EG038609 T. cacao v1.1
Defline:  (1 of 1) PTHR12818//PTHR12818:SF0 - UNCHARACTERIZED // NEF-ASSOCIATED PROTEIN 1 Genomic Order:  1578
Name:  ? Thecc1EG038609 Secondary Identifier:  ? PAC:27426320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038609 0.5kb upstream 0.5kb upstream 8677 true scaffold_9: 10692330-10701006 Theobroma cacao
Thecc1EG038609 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10692330-10692829 Theobroma cacao
Thecc1EG038609 0.5kb downstream 0.5kb downstream 8677 true scaffold_9: 10692830-10701506 Theobroma cacao
Thecc1EG038609 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10701007-10701506 Theobroma cacao
Thecc1EG038609 1.0kb upstream 1.0kb upstream 9177 true scaffold_9: 10691830-10701006 Theobroma cacao
Thecc1EG038609 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10691830-10692829 Theobroma cacao
Thecc1EG038609 1.0kb downstream 1.0kb downstream 9177 true scaffold_9: 10692830-10702006 Theobroma cacao
Thecc1EG038609 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10701007-10702006 Theobroma cacao
Thecc1EG038609 2.0kb upstream 2.0kb upstream 10177 true scaffold_9: 10690830-10701006 Theobroma cacao
Thecc1EG038609 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10690830-10692829 Theobroma cacao
Thecc1EG038609 2.0kb downstream 2.0kb downstream 10177 true scaffold_9: 10692830-10703006 Theobroma cacao
Thecc1EG038609 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10701007-10703006 Theobroma cacao
Thecc1EG038609 5.0kb upstream 5.0kb upstream 13177 true scaffold_9: 10687830-10701006 Theobroma cacao
Thecc1EG038609 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10687830-10692829 Theobroma cacao
Thecc1EG038609 5.0kb downstream 5.0kb downstream 13177 true scaffold_9: 10692830-10706006 Theobroma cacao
Thecc1EG038609 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10701007-10706006 Theobroma cacao
Thecc1EG038609 10.0kb upstream 10.0kb upstream 18177 true scaffold_9: 10682830-10701006 Theobroma cacao
Thecc1EG038609 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10682830-10692829 Theobroma cacao
Thecc1EG038609 10.0kb downstream 10.0kb downstream 18177 true scaffold_9: 10692830-10711006 Theobroma cacao
Thecc1EG038609 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10701007-10711006 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827422 5264 Brassicales-Malvales View MSA
124341116 5266 SBM View MSA
124239899 5268 Malvidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain