Gene : Thecc1EG038586 T. cacao v1.1

Defline:  (1 of 1) PTHR22595:SF43 - EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED Genomic Order:  1564
Name:  ? Thecc1EG038586 Secondary Identifier:  ? PAC:27427308

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038586 0.5kb upstream 0.5kb upstream 1448 true scaffold_9: 10510970-10512417 Theobroma cacao
Thecc1EG038586 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10511918-10512417 Theobroma cacao
Thecc1EG038586 0.5kb downstream 0.5kb downstream 1448 true scaffold_9: 10510470-10511917 Theobroma cacao
Thecc1EG038586 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10510470-10510969 Theobroma cacao
Thecc1EG038586 1.0kb upstream 1.0kb upstream 1948 true scaffold_9: 10510970-10512917 Theobroma cacao
Thecc1EG038586 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10511918-10512917 Theobroma cacao
Thecc1EG038586 1.0kb downstream 1.0kb downstream 1948 true scaffold_9: 10509970-10511917 Theobroma cacao
Thecc1EG038586 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10509970-10510969 Theobroma cacao
Thecc1EG038586 2.0kb upstream 2.0kb upstream 2948 true scaffold_9: 10510970-10513917 Theobroma cacao
Thecc1EG038586 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10511918-10513917 Theobroma cacao
Thecc1EG038586 2.0kb downstream 2.0kb downstream 2948 true scaffold_9: 10508970-10511917 Theobroma cacao
Thecc1EG038586 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10508970-10510969 Theobroma cacao
Thecc1EG038586 5.0kb upstream 5.0kb upstream 5948 true scaffold_9: 10510970-10516917 Theobroma cacao
Thecc1EG038586 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10511918-10516917 Theobroma cacao
Thecc1EG038586 5.0kb downstream 5.0kb downstream 5948 true scaffold_9: 10505970-10511917 Theobroma cacao
Thecc1EG038586 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10505970-10510969 Theobroma cacao
Thecc1EG038586 10.0kb upstream 10.0kb upstream 10948 true scaffold_9: 10510970-10521917 Theobroma cacao
Thecc1EG038586 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10511918-10521917 Theobroma cacao
Thecc1EG038586 10.0kb downstream 10.0kb downstream 10948 true scaffold_9: 10500970-10511917 Theobroma cacao
Thecc1EG038586 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10500970-10510969 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841262 5264 Brassicales-Malvales View MSA
124346425 5266 SBM View MSA
124249870 5268 Malvidae View MSA
124072622 5270 Rosid View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain