Gene : Thecc1EG038484 T. cacao v1.1
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  1519
Name:  ? Thecc1EG038484 Secondary Identifier:  ? PAC:27425727
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5381 Theobroma cacao pathologic  
Tcacao PWY-5695 Theobroma cacao pathologic  
Tcacao PWY-6596 Theobroma cacao pathologic  
Tcacao PWY-6606 Theobroma cacao pathologic  
Tcacao PWY-6608 Theobroma cacao pathologic  
Tcacao PWY-7185 Theobroma cacao pathologic  
Tcacao SALVADEHYPOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038484 0.5kb upstream 0.5kb upstream 13445 true scaffold_9: 9597137-9610581 Theobroma cacao
Thecc1EG038484 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9610082-9610581 Theobroma cacao
Thecc1EG038484 0.5kb downstream 0.5kb downstream 13445 true scaffold_9: 9596637-9610081 Theobroma cacao
Thecc1EG038484 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9596637-9597136 Theobroma cacao
Thecc1EG038484 1.0kb upstream 1.0kb upstream 13945 true scaffold_9: 9597137-9611081 Theobroma cacao
Thecc1EG038484 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9610082-9611081 Theobroma cacao
Thecc1EG038484 1.0kb downstream 1.0kb downstream 13945 true scaffold_9: 9596137-9610081 Theobroma cacao
Thecc1EG038484 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9596137-9597136 Theobroma cacao
Thecc1EG038484 2.0kb upstream 2.0kb upstream 14945 true scaffold_9: 9597137-9612081 Theobroma cacao
Thecc1EG038484 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9610082-9612081 Theobroma cacao
Thecc1EG038484 2.0kb downstream 2.0kb downstream 14945 true scaffold_9: 9595137-9610081 Theobroma cacao
Thecc1EG038484 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9595137-9597136 Theobroma cacao
Thecc1EG038484 5.0kb upstream 5.0kb upstream 17945 true scaffold_9: 9597137-9615081 Theobroma cacao
Thecc1EG038484 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9610082-9615081 Theobroma cacao
Thecc1EG038484 5.0kb downstream 5.0kb downstream 17945 true scaffold_9: 9592137-9610081 Theobroma cacao
Thecc1EG038484 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9592137-9597136 Theobroma cacao
Thecc1EG038484 10.0kb upstream 10.0kb upstream 22945 true scaffold_9: 9597137-9620081 Theobroma cacao
Thecc1EG038484 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9610082-9620081 Theobroma cacao
Thecc1EG038484 10.0kb downstream 10.0kb downstream 22945 true scaffold_9: 9587137-9610081 Theobroma cacao
Thecc1EG038484 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9587137-9597136 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain