Gene : Thecc1EG039308 T. cacao v1.1
Defline:  (1 of 4) PTHR22835//PTHR22835:SF177 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1795
Name:  ? Thecc1EG039308 Secondary Identifier:  ? PAC:27428067
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039308 0.5kb upstream 0.5kb upstream 3385 true scaffold_9: 18065515-18068899 Theobroma cacao
Thecc1EG039308 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 18065515-18066014 Theobroma cacao
Thecc1EG039308 0.5kb downstream 0.5kb downstream 3385 true scaffold_9: 18066015-18069399 Theobroma cacao
Thecc1EG039308 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 18068900-18069399 Theobroma cacao
Thecc1EG039308 1.0kb upstream 1.0kb upstream 3885 true scaffold_9: 18065015-18068899 Theobroma cacao
Thecc1EG039308 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 18065015-18066014 Theobroma cacao
Thecc1EG039308 1.0kb downstream 1.0kb downstream 3885 true scaffold_9: 18066015-18069899 Theobroma cacao
Thecc1EG039308 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 18068900-18069899 Theobroma cacao
Thecc1EG039308 2.0kb upstream 2.0kb upstream 4885 true scaffold_9: 18064015-18068899 Theobroma cacao
Thecc1EG039308 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 18064015-18066014 Theobroma cacao
Thecc1EG039308 2.0kb downstream 2.0kb downstream 4885 true scaffold_9: 18066015-18070899 Theobroma cacao
Thecc1EG039308 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 18068900-18070899 Theobroma cacao
Thecc1EG039308 5.0kb upstream 5.0kb upstream 7885 true scaffold_9: 18061015-18068899 Theobroma cacao
Thecc1EG039308 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 18061015-18066014 Theobroma cacao
Thecc1EG039308 5.0kb downstream 5.0kb downstream 7885 true scaffold_9: 18066015-18073899 Theobroma cacao
Thecc1EG039308 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 18068900-18073899 Theobroma cacao
Thecc1EG039308 10.0kb upstream 10.0kb upstream 12885 true scaffold_9: 18056015-18068899 Theobroma cacao
Thecc1EG039308 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 18056015-18066014 Theobroma cacao
Thecc1EG039308 10.0kb downstream 10.0kb downstream 12885 true scaffold_9: 18066015-18078899 Theobroma cacao
Thecc1EG039308 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 18068900-18078899 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824712 5264 Brassicales-Malvales View MSA
124320302 5266 SBM View MSA
124168589 5268 Malvidae View MSA
124073778 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain