Gene : Thecc1EG039211 T. cacao v1.1
Defline:  (1 of 467) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1760
Name:  ? Thecc1EG039211 Secondary Identifier:  ? PAC:27430388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039211 0.5kb upstream 0.5kb upstream 6611 true scaffold_9: 16974935-16981545 Theobroma cacao
Thecc1EG039211 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16974935-16975434 Theobroma cacao
Thecc1EG039211 0.5kb downstream 0.5kb downstream 6611 true scaffold_9: 16975435-16982045 Theobroma cacao
Thecc1EG039211 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 16981546-16982045 Theobroma cacao
Thecc1EG039211 1.0kb upstream 1.0kb upstream 7111 true scaffold_9: 16974435-16981545 Theobroma cacao
Thecc1EG039211 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 16974435-16975434 Theobroma cacao
Thecc1EG039211 1.0kb downstream 1.0kb downstream 7111 true scaffold_9: 16975435-16982545 Theobroma cacao
Thecc1EG039211 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 16981546-16982545 Theobroma cacao
Thecc1EG039211 2.0kb upstream 2.0kb upstream 8111 true scaffold_9: 16973435-16981545 Theobroma cacao
Thecc1EG039211 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 16973435-16975434 Theobroma cacao
Thecc1EG039211 2.0kb downstream 2.0kb downstream 8111 true scaffold_9: 16975435-16983545 Theobroma cacao
Thecc1EG039211 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 16981546-16983545 Theobroma cacao
Thecc1EG039211 5.0kb upstream 5.0kb upstream 11111 true scaffold_9: 16970435-16981545 Theobroma cacao
Thecc1EG039211 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 16970435-16975434 Theobroma cacao
Thecc1EG039211 5.0kb downstream 5.0kb downstream 11111 true scaffold_9: 16975435-16986545 Theobroma cacao
Thecc1EG039211 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 16981546-16986545 Theobroma cacao
Thecc1EG039211 10.0kb upstream 10.0kb upstream 16111 true scaffold_9: 16965435-16981545 Theobroma cacao
Thecc1EG039211 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 16965435-16975434 Theobroma cacao
Thecc1EG039211 10.0kb downstream 10.0kb downstream 16111 true scaffold_9: 16975435-16991545 Theobroma cacao
Thecc1EG039211 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 16981546-16991545 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831558 5264 Brassicales-Malvales View MSA
124345176 5266 SBM View MSA
124241178 5268 Malvidae View MSA
124060699 5270 Rosid View MSA
123741070 5271 Pentapetalae View MSA
122791611 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain