Gene : Thecc1EG038922 T. cacao v1.1
Defline:  (1 of 12) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  1690
Name:  ? Thecc1EG038922 Secondary Identifier:  ? PAC:27426236
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038922 0.5kb upstream 0.5kb upstream 1188 true scaffold_9: 14041393-14042580 Theobroma cacao
Thecc1EG038922 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14041393-14041892 Theobroma cacao
Thecc1EG038922 0.5kb downstream 0.5kb downstream 1188 true scaffold_9: 14041893-14043080 Theobroma cacao
Thecc1EG038922 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14042581-14043080 Theobroma cacao
Thecc1EG038922 1.0kb upstream 1.0kb upstream 1688 true scaffold_9: 14040893-14042580 Theobroma cacao
Thecc1EG038922 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14040893-14041892 Theobroma cacao
Thecc1EG038922 1.0kb downstream 1.0kb downstream 1688 true scaffold_9: 14041893-14043580 Theobroma cacao
Thecc1EG038922 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14042581-14043580 Theobroma cacao
Thecc1EG038922 2.0kb upstream 2.0kb upstream 2688 true scaffold_9: 14039893-14042580 Theobroma cacao
Thecc1EG038922 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14039893-14041892 Theobroma cacao
Thecc1EG038922 2.0kb downstream 2.0kb downstream 2688 true scaffold_9: 14041893-14044580 Theobroma cacao
Thecc1EG038922 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14042581-14044580 Theobroma cacao
Thecc1EG038922 5.0kb upstream 5.0kb upstream 5688 true scaffold_9: 14036893-14042580 Theobroma cacao
Thecc1EG038922 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14036893-14041892 Theobroma cacao
Thecc1EG038922 5.0kb downstream 5.0kb downstream 5688 true scaffold_9: 14041893-14047580 Theobroma cacao
Thecc1EG038922 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14042581-14047580 Theobroma cacao
Thecc1EG038922 10.0kb upstream 10.0kb upstream 10688 true scaffold_9: 14031893-14042580 Theobroma cacao
Thecc1EG038922 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14031893-14041892 Theobroma cacao
Thecc1EG038922 10.0kb downstream 10.0kb downstream 10688 true scaffold_9: 14041893-14052580 Theobroma cacao
Thecc1EG038922 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14042581-14052580 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823350 5264 Brassicales-Malvales Singleton cluster - no MSA
124319437 5266 SBM Singleton cluster - no MSA
124248208 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain