Gene : Thecc1EG038994 T. cacao v1.1
Defline:  (1 of 3) 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase Genomic Order:  1705
Name:  ? Thecc1EG038994 Secondary Identifier:  ? PAC:27425685
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY1F-FLAVSYN Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  
Tcacao PWY-6435 Theobroma cacao pathologic  
Tcacao PWY-6673 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038994 0.5kb upstream 0.5kb upstream 8957 true scaffold_9: 14768139-14777095 Theobroma cacao
Thecc1EG038994 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14776596-14777095 Theobroma cacao
Thecc1EG038994 0.5kb downstream 0.5kb downstream 8957 true scaffold_9: 14767639-14776595 Theobroma cacao
Thecc1EG038994 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14767639-14768138 Theobroma cacao
Thecc1EG038994 1.0kb upstream 1.0kb upstream 9457 true scaffold_9: 14768139-14777595 Theobroma cacao
Thecc1EG038994 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14776596-14777595 Theobroma cacao
Thecc1EG038994 1.0kb downstream 1.0kb downstream 9457 true scaffold_9: 14767139-14776595 Theobroma cacao
Thecc1EG038994 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14767139-14768138 Theobroma cacao
Thecc1EG038994 2.0kb upstream 2.0kb upstream 10457 true scaffold_9: 14768139-14778595 Theobroma cacao
Thecc1EG038994 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14776596-14778595 Theobroma cacao
Thecc1EG038994 2.0kb downstream 2.0kb downstream 10457 true scaffold_9: 14766139-14776595 Theobroma cacao
Thecc1EG038994 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14766139-14768138 Theobroma cacao
Thecc1EG038994 5.0kb upstream 5.0kb upstream 13457 true scaffold_9: 14768139-14781595 Theobroma cacao
Thecc1EG038994 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14776596-14781595 Theobroma cacao
Thecc1EG038994 5.0kb downstream 5.0kb downstream 13457 true scaffold_9: 14763139-14776595 Theobroma cacao
Thecc1EG038994 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14763139-14768138 Theobroma cacao
Thecc1EG038994 10.0kb upstream 10.0kb upstream 18457 true scaffold_9: 14768139-14786595 Theobroma cacao
Thecc1EG038994 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14776596-14786595 Theobroma cacao
Thecc1EG038994 10.0kb downstream 10.0kb downstream 18457 true scaffold_9: 14758139-14776595 Theobroma cacao
Thecc1EG038994 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 14758139-14768138 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826793 5264 Brassicales-Malvales View MSA
124349343 5266 SBM View MSA
124253701 5268 Malvidae View MSA
124064969 5270 Rosid View MSA
123741286 5271 Pentapetalae View MSA
122790673 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain