Gene : Thecc1EG038916 T. cacao v1.1
Defline:  (1 of 6) PF13963 - Transposase-associated domain (Transpos_assoc) Genomic Order:  1684
Name:  ? Thecc1EG038916 Secondary Identifier:  ? PAC:27429876
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038916 0.5kb upstream 0.5kb upstream 3368 true scaffold_9: 14008445-14011812 Theobroma cacao
Thecc1EG038916 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 14011313-14011812 Theobroma cacao
Thecc1EG038916 0.5kb downstream 0.5kb downstream 3368 true scaffold_9: 14007945-14011312 Theobroma cacao
Thecc1EG038916 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 14007945-14008444 Theobroma cacao
Thecc1EG038916 1.0kb upstream 1.0kb upstream 3868 true scaffold_9: 14008445-14012312 Theobroma cacao
Thecc1EG038916 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 14011313-14012312 Theobroma cacao
Thecc1EG038916 1.0kb downstream 1.0kb downstream 3868 true scaffold_9: 14007445-14011312 Theobroma cacao
Thecc1EG038916 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 14007445-14008444 Theobroma cacao
Thecc1EG038916 2.0kb upstream 2.0kb upstream 4868 true scaffold_9: 14008445-14013312 Theobroma cacao
Thecc1EG038916 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14011313-14013312 Theobroma cacao
Thecc1EG038916 2.0kb downstream 2.0kb downstream 4868 true scaffold_9: 14006445-14011312 Theobroma cacao
Thecc1EG038916 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 14006445-14008444 Theobroma cacao
Thecc1EG038916 5.0kb upstream 5.0kb upstream 7868 true scaffold_9: 14008445-14016312 Theobroma cacao
Thecc1EG038916 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 14011313-14016312 Theobroma cacao
Thecc1EG038916 5.0kb downstream 5.0kb downstream 7868 true scaffold_9: 14003445-14011312 Theobroma cacao
Thecc1EG038916 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 14003445-14008444 Theobroma cacao
Thecc1EG038916 10.0kb upstream 10.0kb upstream 12868 true scaffold_9: 14008445-14021312 Theobroma cacao
Thecc1EG038916 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 14011313-14021312 Theobroma cacao
Thecc1EG038916 10.0kb downstream 10.0kb downstream 12868 true scaffold_9: 13998445-14011312 Theobroma cacao
Thecc1EG038916 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 13998445-14008444 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841113 5264 Brassicales-Malvales View MSA
124322847 5266 SBM View MSA
124237670 5268 Malvidae View MSA
124039032 5270 Rosid View MSA
123752947 5271 Pentapetalae View MSA
122774877 5272 Eudicot View MSA
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain