Gene : Thecc1EG039778 T. cacao v1.1
Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1967
Name:  ? Thecc1EG039778 Secondary Identifier:  ? PAC:27430280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039778 0.5kb upstream 0.5kb upstream 2494 true scaffold_9: 22793744-22796237 Theobroma cacao
Thecc1EG039778 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 22793744-22794243 Theobroma cacao
Thecc1EG039778 0.5kb downstream 0.5kb downstream 2494 true scaffold_9: 22794244-22796737 Theobroma cacao
Thecc1EG039778 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 22796238-22796737 Theobroma cacao
Thecc1EG039778 1.0kb upstream 1.0kb upstream 2994 true scaffold_9: 22793244-22796237 Theobroma cacao
Thecc1EG039778 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 22793244-22794243 Theobroma cacao
Thecc1EG039778 1.0kb downstream 1.0kb downstream 2994 true scaffold_9: 22794244-22797237 Theobroma cacao
Thecc1EG039778 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 22796238-22797237 Theobroma cacao
Thecc1EG039778 2.0kb upstream 2.0kb upstream 3994 true scaffold_9: 22792244-22796237 Theobroma cacao
Thecc1EG039778 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 22792244-22794243 Theobroma cacao
Thecc1EG039778 2.0kb downstream 2.0kb downstream 3994 true scaffold_9: 22794244-22798237 Theobroma cacao
Thecc1EG039778 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 22796238-22798237 Theobroma cacao
Thecc1EG039778 5.0kb upstream 5.0kb upstream 6994 true scaffold_9: 22789244-22796237 Theobroma cacao
Thecc1EG039778 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 22789244-22794243 Theobroma cacao
Thecc1EG039778 5.0kb downstream 5.0kb downstream 6994 true scaffold_9: 22794244-22801237 Theobroma cacao
Thecc1EG039778 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 22796238-22801237 Theobroma cacao
Thecc1EG039778 10.0kb upstream 10.0kb upstream 11994 true scaffold_9: 22784244-22796237 Theobroma cacao
Thecc1EG039778 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 22784244-22794243 Theobroma cacao
Thecc1EG039778 10.0kb downstream 10.0kb downstream 11994 true scaffold_9: 22794244-22806237 Theobroma cacao
Thecc1EG039778 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 22796238-22806237 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839578 5264 Brassicales-Malvales View MSA
124350743 5266 SBM View MSA
124254082 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain