Gene : Thecc1EG039626 T. cacao v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF112 - GLUTAREDOXIN // GLUTAREDOXIN-C4 Genomic Order:  1916
Name:  ? Thecc1EG039626 Secondary Identifier:  ? PAC:27426708
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039626 0.5kb upstream 0.5kb upstream 1995 true scaffold_9: 21376587-21378581 Theobroma cacao
Thecc1EG039626 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 21376587-21377086 Theobroma cacao
Thecc1EG039626 0.5kb downstream 0.5kb downstream 1995 true scaffold_9: 21377087-21379081 Theobroma cacao
Thecc1EG039626 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 21378582-21379081 Theobroma cacao
Thecc1EG039626 1.0kb upstream 1.0kb upstream 2495 true scaffold_9: 21376087-21378581 Theobroma cacao
Thecc1EG039626 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 21376087-21377086 Theobroma cacao
Thecc1EG039626 1.0kb downstream 1.0kb downstream 2495 true scaffold_9: 21377087-21379581 Theobroma cacao
Thecc1EG039626 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 21378582-21379581 Theobroma cacao
Thecc1EG039626 2.0kb upstream 2.0kb upstream 3495 true scaffold_9: 21375087-21378581 Theobroma cacao
Thecc1EG039626 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 21375087-21377086 Theobroma cacao
Thecc1EG039626 2.0kb downstream 2.0kb downstream 3495 true scaffold_9: 21377087-21380581 Theobroma cacao
Thecc1EG039626 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 21378582-21380581 Theobroma cacao
Thecc1EG039626 5.0kb upstream 5.0kb upstream 6495 true scaffold_9: 21372087-21378581 Theobroma cacao
Thecc1EG039626 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 21372087-21377086 Theobroma cacao
Thecc1EG039626 5.0kb downstream 5.0kb downstream 6495 true scaffold_9: 21377087-21383581 Theobroma cacao
Thecc1EG039626 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 21378582-21383581 Theobroma cacao
Thecc1EG039626 10.0kb upstream 10.0kb upstream 11495 true scaffold_9: 21367087-21378581 Theobroma cacao
Thecc1EG039626 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 21367087-21377086 Theobroma cacao
Thecc1EG039626 10.0kb downstream 10.0kb downstream 11495 true scaffold_9: 21377087-21388581 Theobroma cacao
Thecc1EG039626 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 21378582-21388581 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain