Gene : Thecc1EG039613 T. cacao v1.1
Defline:  (1 of 1) PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 Genomic Order:  1913
Name:  ? Thecc1EG039613 Secondary Identifier:  ? PAC:27425654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039613 0.5kb upstream 0.5kb upstream 5378 true scaffold_9: 21149848-21155225 Theobroma cacao
Thecc1EG039613 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 21149848-21150347 Theobroma cacao
Thecc1EG039613 0.5kb downstream 0.5kb downstream 5378 true scaffold_9: 21150348-21155725 Theobroma cacao
Thecc1EG039613 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 21155226-21155725 Theobroma cacao
Thecc1EG039613 1.0kb upstream 1.0kb upstream 5878 true scaffold_9: 21149348-21155225 Theobroma cacao
Thecc1EG039613 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 21149348-21150347 Theobroma cacao
Thecc1EG039613 1.0kb downstream 1.0kb downstream 5878 true scaffold_9: 21150348-21156225 Theobroma cacao
Thecc1EG039613 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 21155226-21156225 Theobroma cacao
Thecc1EG039613 2.0kb upstream 2.0kb upstream 6878 true scaffold_9: 21148348-21155225 Theobroma cacao
Thecc1EG039613 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 21148348-21150347 Theobroma cacao
Thecc1EG039613 2.0kb downstream 2.0kb downstream 6878 true scaffold_9: 21150348-21157225 Theobroma cacao
Thecc1EG039613 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 21155226-21157225 Theobroma cacao
Thecc1EG039613 5.0kb upstream 5.0kb upstream 9878 true scaffold_9: 21145348-21155225 Theobroma cacao
Thecc1EG039613 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 21145348-21150347 Theobroma cacao
Thecc1EG039613 5.0kb downstream 5.0kb downstream 9878 true scaffold_9: 21150348-21160225 Theobroma cacao
Thecc1EG039613 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 21155226-21160225 Theobroma cacao
Thecc1EG039613 10.0kb upstream 10.0kb upstream 14878 true scaffold_9: 21140348-21155225 Theobroma cacao
Thecc1EG039613 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 21140348-21150347 Theobroma cacao
Thecc1EG039613 10.0kb downstream 10.0kb downstream 14878 true scaffold_9: 21150348-21165225 Theobroma cacao
Thecc1EG039613 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 21155226-21165225 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837176 5264 Brassicales-Malvales View MSA
124341459 5266 SBM View MSA
124248362 5268 Malvidae View MSA
124071277 5270 Rosid View MSA
123738497 5271 Pentapetalae View MSA
122794212 5272 Eudicot View MSA
122048501 5273 Angiosperm View MSA
121348991 5274 Embryophyte View MSA
123425594 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain