Gene : Thecc1EG039576 T. cacao v1.1
Defline:  (1 of 1) 2.7.1.44 - Galacturonokinase Genomic Order:  1897
Name:  ? Thecc1EG039576 Secondary Identifier:  ? PAC:27429918
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039576 0.5kb upstream 0.5kb upstream 14096 true scaffold_9: 20689621-20703716 Theobroma cacao
Thecc1EG039576 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 20689621-20690120 Theobroma cacao
Thecc1EG039576 0.5kb downstream 0.5kb downstream 14096 true scaffold_9: 20690121-20704216 Theobroma cacao
Thecc1EG039576 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 20703717-20704216 Theobroma cacao
Thecc1EG039576 1.0kb upstream 1.0kb upstream 14596 true scaffold_9: 20689121-20703716 Theobroma cacao
Thecc1EG039576 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 20689121-20690120 Theobroma cacao
Thecc1EG039576 1.0kb downstream 1.0kb downstream 14596 true scaffold_9: 20690121-20704716 Theobroma cacao
Thecc1EG039576 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 20703717-20704716 Theobroma cacao
Thecc1EG039576 2.0kb upstream 2.0kb upstream 15596 true scaffold_9: 20688121-20703716 Theobroma cacao
Thecc1EG039576 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 20688121-20690120 Theobroma cacao
Thecc1EG039576 2.0kb downstream 2.0kb downstream 15596 true scaffold_9: 20690121-20705716 Theobroma cacao
Thecc1EG039576 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 20703717-20705716 Theobroma cacao
Thecc1EG039576 5.0kb upstream 5.0kb upstream 18596 true scaffold_9: 20685121-20703716 Theobroma cacao
Thecc1EG039576 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 20685121-20690120 Theobroma cacao
Thecc1EG039576 5.0kb downstream 5.0kb downstream 18596 true scaffold_9: 20690121-20708716 Theobroma cacao
Thecc1EG039576 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 20703717-20708716 Theobroma cacao
Thecc1EG039576 10.0kb upstream 10.0kb upstream 23596 true scaffold_9: 20680121-20703716 Theobroma cacao
Thecc1EG039576 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 20680121-20690120 Theobroma cacao
Thecc1EG039576 10.0kb downstream 10.0kb downstream 23596 true scaffold_9: 20690121-20713716 Theobroma cacao
Thecc1EG039576 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 20703717-20713716 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828749 5264 Brassicales-Malvales View MSA
124339525 5266 SBM View MSA
124242560 5268 Malvidae View MSA
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain