Gene : Thecc1EG039547 T. cacao v1.1
Defline:  EF-hand domain-containing protein 1 Genomic Order:  1891
Name:  ? Thecc1EG039547 Secondary Identifier:  ? PAC:27431124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039547 0.5kb upstream 0.5kb upstream 1613 true scaffold_9: 20412991-20414603 Theobroma cacao
Thecc1EG039547 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 20414104-20414603 Theobroma cacao
Thecc1EG039547 0.5kb downstream 0.5kb downstream 1613 true scaffold_9: 20412491-20414103 Theobroma cacao
Thecc1EG039547 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 20412491-20412990 Theobroma cacao
Thecc1EG039547 1.0kb upstream 1.0kb upstream 2113 true scaffold_9: 20412991-20415103 Theobroma cacao
Thecc1EG039547 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 20414104-20415103 Theobroma cacao
Thecc1EG039547 1.0kb downstream 1.0kb downstream 2113 true scaffold_9: 20411991-20414103 Theobroma cacao
Thecc1EG039547 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 20411991-20412990 Theobroma cacao
Thecc1EG039547 2.0kb upstream 2.0kb upstream 3113 true scaffold_9: 20412991-20416103 Theobroma cacao
Thecc1EG039547 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 20414104-20416103 Theobroma cacao
Thecc1EG039547 2.0kb downstream 2.0kb downstream 3113 true scaffold_9: 20410991-20414103 Theobroma cacao
Thecc1EG039547 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 20410991-20412990 Theobroma cacao
Thecc1EG039547 5.0kb upstream 5.0kb upstream 6113 true scaffold_9: 20412991-20419103 Theobroma cacao
Thecc1EG039547 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 20414104-20419103 Theobroma cacao
Thecc1EG039547 5.0kb downstream 5.0kb downstream 6113 true scaffold_9: 20407991-20414103 Theobroma cacao
Thecc1EG039547 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 20407991-20412990 Theobroma cacao
Thecc1EG039547 10.0kb upstream 10.0kb upstream 11113 true scaffold_9: 20412991-20424103 Theobroma cacao
Thecc1EG039547 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 20414104-20424103 Theobroma cacao
Thecc1EG039547 10.0kb downstream 10.0kb downstream 11113 true scaffold_9: 20402991-20414103 Theobroma cacao
Thecc1EG039547 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 20402991-20412990 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829334 5264 Brassicales-Malvales View MSA
124342323 5266 SBM View MSA
124248689 5268 Malvidae View MSA
124061523 5270 Rosid View MSA
123745680 5271 Pentapetalae View MSA
122791482 5272 Eudicot View MSA
122044316 5273 Angiosperm View MSA
121310275 5274 Embryophyte View MSA
123347809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain