Gene : Thecc1EG039500 T. cacao v1.1
Defline:  Uncharacterized protein (52%P) Genomic Order:  1875
Name:  ? Thecc1EG039500 Secondary Identifier:  ? PAC:27428582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039500 0.5kb upstream 0.5kb upstream 3663 true scaffold_9: 19795376-19799038 Theobroma cacao
Thecc1EG039500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 19798539-19799038 Theobroma cacao
Thecc1EG039500 0.5kb downstream 0.5kb downstream 3663 true scaffold_9: 19794876-19798538 Theobroma cacao
Thecc1EG039500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 19794876-19795375 Theobroma cacao
Thecc1EG039500 1.0kb upstream 1.0kb upstream 4163 true scaffold_9: 19795376-19799538 Theobroma cacao
Thecc1EG039500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 19798539-19799538 Theobroma cacao
Thecc1EG039500 1.0kb downstream 1.0kb downstream 4163 true scaffold_9: 19794376-19798538 Theobroma cacao
Thecc1EG039500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 19794376-19795375 Theobroma cacao
Thecc1EG039500 2.0kb upstream 2.0kb upstream 5163 true scaffold_9: 19795376-19800538 Theobroma cacao
Thecc1EG039500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 19798539-19800538 Theobroma cacao
Thecc1EG039500 2.0kb downstream 2.0kb downstream 5163 true scaffold_9: 19793376-19798538 Theobroma cacao
Thecc1EG039500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 19793376-19795375 Theobroma cacao
Thecc1EG039500 5.0kb upstream 5.0kb upstream 8163 true scaffold_9: 19795376-19803538 Theobroma cacao
Thecc1EG039500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 19798539-19803538 Theobroma cacao
Thecc1EG039500 5.0kb downstream 5.0kb downstream 8163 true scaffold_9: 19790376-19798538 Theobroma cacao
Thecc1EG039500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 19790376-19795375 Theobroma cacao
Thecc1EG039500 10.0kb upstream 10.0kb upstream 13163 true scaffold_9: 19795376-19808538 Theobroma cacao
Thecc1EG039500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 19798539-19808538 Theobroma cacao
Thecc1EG039500 10.0kb downstream 10.0kb downstream 13163 true scaffold_9: 19785376-19798538 Theobroma cacao
Thecc1EG039500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 19785376-19795375 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026252 5273 Angiosperm View MSA
123837247 5264 Brassicales-Malvales View MSA
124338045 5266 SBM View MSA
124239804 5268 Malvidae View MSA
124062851 5270 Rosid View MSA
123741515 5271 Pentapetalae View MSA
122796555 5272 Eudicot View MSA
121296245 5274 Embryophyte View MSA
123334442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain