Gene : Thecc1EG039418 T. cacao v1.1
Defline:  (1 of 30) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  1841
Name:  ? Thecc1EG039418 Secondary Identifier:  ? PAC:27429388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039418 0.5kb upstream 0.5kb upstream 1338 true scaffold_9: 19112511-19113848 Theobroma cacao
Thecc1EG039418 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 19112511-19113010 Theobroma cacao
Thecc1EG039418 0.5kb downstream 0.5kb downstream 1338 true scaffold_9: 19113011-19114348 Theobroma cacao
Thecc1EG039418 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 19113849-19114348 Theobroma cacao
Thecc1EG039418 1.0kb upstream 1.0kb upstream 1838 true scaffold_9: 19112011-19113848 Theobroma cacao
Thecc1EG039418 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 19112011-19113010 Theobroma cacao
Thecc1EG039418 1.0kb downstream 1.0kb downstream 1838 true scaffold_9: 19113011-19114848 Theobroma cacao
Thecc1EG039418 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 19113849-19114848 Theobroma cacao
Thecc1EG039418 2.0kb upstream 2.0kb upstream 2838 true scaffold_9: 19111011-19113848 Theobroma cacao
Thecc1EG039418 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 19111011-19113010 Theobroma cacao
Thecc1EG039418 2.0kb downstream 2.0kb downstream 2838 true scaffold_9: 19113011-19115848 Theobroma cacao
Thecc1EG039418 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 19113849-19115848 Theobroma cacao
Thecc1EG039418 5.0kb upstream 5.0kb upstream 5838 true scaffold_9: 19108011-19113848 Theobroma cacao
Thecc1EG039418 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 19108011-19113010 Theobroma cacao
Thecc1EG039418 5.0kb downstream 5.0kb downstream 5838 true scaffold_9: 19113011-19118848 Theobroma cacao
Thecc1EG039418 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 19113849-19118848 Theobroma cacao
Thecc1EG039418 10.0kb upstream 10.0kb upstream 10838 true scaffold_9: 19103011-19113848 Theobroma cacao
Thecc1EG039418 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 19103011-19113010 Theobroma cacao
Thecc1EG039418 10.0kb downstream 10.0kb downstream 10838 true scaffold_9: 19113011-19123848 Theobroma cacao
Thecc1EG039418 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 19113849-19123848 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826559 5264 Brassicales-Malvales View MSA
124351354 5266 SBM View MSA
124247078 5268 Malvidae View MSA
124069920 5270 Rosid View MSA
123747179 5271 Pentapetalae View MSA
122795412 5272 Eudicot View MSA
122048681 5273 Angiosperm View MSA
121311070 5274 Embryophyte View MSA
123348418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain