Gene : Thecc1EG040203 T. cacao v1.1
Defline:  (1 of 1) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  2088
Name:  ? Thecc1EG040203 Secondary Identifier:  ? PAC:27429010
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040203 0.5kb upstream 0.5kb upstream 4482 true scaffold_9: 27957763-27962244 Theobroma cacao
Thecc1EG040203 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 27961745-27962244 Theobroma cacao
Thecc1EG040203 0.5kb downstream 0.5kb downstream 4482 true scaffold_9: 27957263-27961744 Theobroma cacao
Thecc1EG040203 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 27957263-27957762 Theobroma cacao
Thecc1EG040203 1.0kb upstream 1.0kb upstream 4982 true scaffold_9: 27957763-27962744 Theobroma cacao
Thecc1EG040203 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 27961745-27962744 Theobroma cacao
Thecc1EG040203 1.0kb downstream 1.0kb downstream 4982 true scaffold_9: 27956763-27961744 Theobroma cacao
Thecc1EG040203 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 27956763-27957762 Theobroma cacao
Thecc1EG040203 2.0kb upstream 2.0kb upstream 5982 true scaffold_9: 27957763-27963744 Theobroma cacao
Thecc1EG040203 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 27961745-27963744 Theobroma cacao
Thecc1EG040203 2.0kb downstream 2.0kb downstream 5982 true scaffold_9: 27955763-27961744 Theobroma cacao
Thecc1EG040203 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 27955763-27957762 Theobroma cacao
Thecc1EG040203 5.0kb upstream 5.0kb upstream 8982 true scaffold_9: 27957763-27966744 Theobroma cacao
Thecc1EG040203 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 27961745-27966744 Theobroma cacao
Thecc1EG040203 5.0kb downstream 5.0kb downstream 8982 true scaffold_9: 27952763-27961744 Theobroma cacao
Thecc1EG040203 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 27952763-27957762 Theobroma cacao
Thecc1EG040203 10.0kb upstream 10.0kb upstream 13982 true scaffold_9: 27957763-27971744 Theobroma cacao
Thecc1EG040203 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 27961745-27971744 Theobroma cacao
Thecc1EG040203 10.0kb downstream 10.0kb downstream 13982 true scaffold_9: 27947763-27961744 Theobroma cacao
Thecc1EG040203 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 27947763-27957762 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
123823478 5264 Brassicales-Malvales Singleton cluster - no MSA
124319559 5266 SBM Singleton cluster - no MSA
124168099 5268 Malvidae Singleton cluster - no MSA
124039719 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain