Gene : Thecc1EG040038 T. cacao v1.1
Defline:  (1 of 2) PTHR23147//PTHR23147:SF6 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2047
Name:  ? Thecc1EG040038 Secondary Identifier:  ? PAC:27427393
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040038 0.5kb upstream 0.5kb upstream 4714 true scaffold_9: 26276848-26281561 Theobroma cacao
Thecc1EG040038 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 26276848-26277347 Theobroma cacao
Thecc1EG040038 0.5kb downstream 0.5kb downstream 4714 true scaffold_9: 26277348-26282061 Theobroma cacao
Thecc1EG040038 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 26281562-26282061 Theobroma cacao
Thecc1EG040038 1.0kb upstream 1.0kb upstream 5214 true scaffold_9: 26276348-26281561 Theobroma cacao
Thecc1EG040038 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 26276348-26277347 Theobroma cacao
Thecc1EG040038 1.0kb downstream 1.0kb downstream 5214 true scaffold_9: 26277348-26282561 Theobroma cacao
Thecc1EG040038 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 26281562-26282561 Theobroma cacao
Thecc1EG040038 2.0kb upstream 2.0kb upstream 6214 true scaffold_9: 26275348-26281561 Theobroma cacao
Thecc1EG040038 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 26275348-26277347 Theobroma cacao
Thecc1EG040038 2.0kb downstream 2.0kb downstream 6214 true scaffold_9: 26277348-26283561 Theobroma cacao
Thecc1EG040038 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 26281562-26283561 Theobroma cacao
Thecc1EG040038 5.0kb upstream 5.0kb upstream 9214 true scaffold_9: 26272348-26281561 Theobroma cacao
Thecc1EG040038 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 26272348-26277347 Theobroma cacao
Thecc1EG040038 5.0kb downstream 5.0kb downstream 9214 true scaffold_9: 26277348-26286561 Theobroma cacao
Thecc1EG040038 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 26281562-26286561 Theobroma cacao
Thecc1EG040038 10.0kb upstream 10.0kb upstream 14214 true scaffold_9: 26267348-26281561 Theobroma cacao
Thecc1EG040038 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 26267348-26277347 Theobroma cacao
Thecc1EG040038 10.0kb downstream 10.0kb downstream 14214 true scaffold_9: 26277348-26291561 Theobroma cacao
Thecc1EG040038 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 26281562-26291561 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837044 5264 Brassicales-Malvales View MSA
124336689 5266 SBM View MSA
124238821 5268 Malvidae View MSA
124061952 5270 Rosid View MSA
123751655 5271 Pentapetalae View MSA
122788413 5272 Eudicot View MSA
122045186 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349478 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain