Gene : Thecc1EG039810 T. cacao v1.1
Defline:  (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Genomic Order:  1977
Name:  ? Thecc1EG039810 Secondary Identifier:  ? PAC:27427727
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039810 0.5kb upstream 0.5kb upstream 19130 true scaffold_9: 23250284-23269413 Theobroma cacao
Thecc1EG039810 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 23268914-23269413 Theobroma cacao
Thecc1EG039810 0.5kb downstream 0.5kb downstream 19130 true scaffold_9: 23249784-23268913 Theobroma cacao
Thecc1EG039810 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 23249784-23250283 Theobroma cacao
Thecc1EG039810 1.0kb upstream 1.0kb upstream 19630 true scaffold_9: 23250284-23269913 Theobroma cacao
Thecc1EG039810 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 23268914-23269913 Theobroma cacao
Thecc1EG039810 1.0kb downstream 1.0kb downstream 19630 true scaffold_9: 23249284-23268913 Theobroma cacao
Thecc1EG039810 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 23249284-23250283 Theobroma cacao
Thecc1EG039810 2.0kb upstream 2.0kb upstream 20630 true scaffold_9: 23250284-23270913 Theobroma cacao
Thecc1EG039810 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 23268914-23270913 Theobroma cacao
Thecc1EG039810 2.0kb downstream 2.0kb downstream 20630 true scaffold_9: 23248284-23268913 Theobroma cacao
Thecc1EG039810 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 23248284-23250283 Theobroma cacao
Thecc1EG039810 5.0kb upstream 5.0kb upstream 23630 true scaffold_9: 23250284-23273913 Theobroma cacao
Thecc1EG039810 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 23268914-23273913 Theobroma cacao
Thecc1EG039810 5.0kb downstream 5.0kb downstream 23630 true scaffold_9: 23245284-23268913 Theobroma cacao
Thecc1EG039810 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 23245284-23250283 Theobroma cacao
Thecc1EG039810 10.0kb upstream 10.0kb upstream 28630 true scaffold_9: 23250284-23278913 Theobroma cacao
Thecc1EG039810 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 23268914-23278913 Theobroma cacao
Thecc1EG039810 10.0kb downstream 10.0kb downstream 28630 true scaffold_9: 23240284-23268913 Theobroma cacao
Thecc1EG039810 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 23240284-23250283 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782467 5273 Angiosperm View MSA
123823111 5264 Brassicales-Malvales Singleton cluster - no MSA
124319212 5266 SBM Singleton cluster - no MSA
124167781 5268 Malvidae Singleton cluster - no MSA
123891258 5270 Rosid Singleton cluster - no MSA
123752904 5271 Pentapetalae View MSA
122774849 5272 Eudicot View MSA
121351013 5274 Embryophyte View MSA
123381971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain