Gene : Thecc1EG040564 T. cacao v1.1
Defline:  (1 of 103) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2235
Name:  ? Thecc1EG040564 Secondary Identifier:  ? PAC:27427554
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040564 0.5kb upstream 0.5kb upstream 3964 true scaffold_9: 31535974-31539937 Theobroma cacao
Thecc1EG040564 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 31539438-31539937 Theobroma cacao
Thecc1EG040564 0.5kb downstream 0.5kb downstream 3964 true scaffold_9: 31535474-31539437 Theobroma cacao
Thecc1EG040564 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 31535474-31535973 Theobroma cacao
Thecc1EG040564 1.0kb upstream 1.0kb upstream 4464 true scaffold_9: 31535974-31540437 Theobroma cacao
Thecc1EG040564 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 31539438-31540437 Theobroma cacao
Thecc1EG040564 1.0kb downstream 1.0kb downstream 4464 true scaffold_9: 31534974-31539437 Theobroma cacao
Thecc1EG040564 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 31534974-31535973 Theobroma cacao
Thecc1EG040564 2.0kb upstream 2.0kb upstream 5464 true scaffold_9: 31535974-31541437 Theobroma cacao
Thecc1EG040564 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 31539438-31541437 Theobroma cacao
Thecc1EG040564 2.0kb downstream 2.0kb downstream 5464 true scaffold_9: 31533974-31539437 Theobroma cacao
Thecc1EG040564 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 31533974-31535973 Theobroma cacao
Thecc1EG040564 5.0kb upstream 5.0kb upstream 8464 true scaffold_9: 31535974-31544437 Theobroma cacao
Thecc1EG040564 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 31539438-31544437 Theobroma cacao
Thecc1EG040564 5.0kb downstream 5.0kb downstream 8464 true scaffold_9: 31530974-31539437 Theobroma cacao
Thecc1EG040564 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 31530974-31535973 Theobroma cacao
Thecc1EG040564 10.0kb upstream 10.0kb upstream 13464 true scaffold_9: 31535974-31549437 Theobroma cacao
Thecc1EG040564 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 31539438-31549437 Theobroma cacao
Thecc1EG040564 10.0kb downstream 10.0kb downstream 13464 true scaffold_9: 31525974-31539437 Theobroma cacao
Thecc1EG040564 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 31525974-31535973 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828377 5264 Brassicales-Malvales View MSA
124344596 5266 SBM View MSA
124238835 5268 Malvidae View MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain