Gene : Thecc1EG040435 T. cacao v1.1

Defline:  (1 of 3) PTHR12203//PTHR12203:SF32 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED Genomic Order:  2175
Name:  ? Thecc1EG040435 Secondary Identifier:  ? PAC:27427922

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040435 0.5kb upstream 0.5kb upstream 2060 true scaffold_9: 30246011-30248070 Theobroma cacao
Thecc1EG040435 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 30247571-30248070 Theobroma cacao
Thecc1EG040435 0.5kb downstream 0.5kb downstream 2060 true scaffold_9: 30245511-30247570 Theobroma cacao
Thecc1EG040435 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 30245511-30246010 Theobroma cacao
Thecc1EG040435 1.0kb upstream 1.0kb upstream 2560 true scaffold_9: 30246011-30248570 Theobroma cacao
Thecc1EG040435 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 30247571-30248570 Theobroma cacao
Thecc1EG040435 1.0kb downstream 1.0kb downstream 2560 true scaffold_9: 30245011-30247570 Theobroma cacao
Thecc1EG040435 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 30245011-30246010 Theobroma cacao
Thecc1EG040435 2.0kb upstream 2.0kb upstream 3560 true scaffold_9: 30246011-30249570 Theobroma cacao
Thecc1EG040435 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 30247571-30249570 Theobroma cacao
Thecc1EG040435 2.0kb downstream 2.0kb downstream 3560 true scaffold_9: 30244011-30247570 Theobroma cacao
Thecc1EG040435 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 30244011-30246010 Theobroma cacao
Thecc1EG040435 5.0kb upstream 5.0kb upstream 6560 true scaffold_9: 30246011-30252570 Theobroma cacao
Thecc1EG040435 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 30247571-30252570 Theobroma cacao
Thecc1EG040435 5.0kb downstream 5.0kb downstream 6560 true scaffold_9: 30241011-30247570 Theobroma cacao
Thecc1EG040435 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 30241011-30246010 Theobroma cacao
Thecc1EG040435 10.0kb upstream 10.0kb upstream 11560 true scaffold_9: 30246011-30257570 Theobroma cacao
Thecc1EG040435 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 30247571-30257570 Theobroma cacao
Thecc1EG040435 10.0kb downstream 10.0kb downstream 11560 true scaffold_9: 30236011-30247570 Theobroma cacao
Thecc1EG040435 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 30236011-30246010 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121524410 5273 Angiosperm Singleton cluster - no MSA
123823079 5264 Brassicales-Malvales Singleton cluster - no MSA
124319180 5266 SBM Singleton cluster - no MSA
124167755 5268 Malvidae Singleton cluster - no MSA
123891235 5270 Rosid Singleton cluster - no MSA
123473534 5271 Pentapetalae Singleton cluster - no MSA
122508818 5272 Eudicot Singleton cluster - no MSA
120797195 5274 Embryophyte Singleton cluster - no MSA
122838777 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain